NONHSAT075819

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT075819

Source

NONCODE4.0

Same with

,

Classification

antisense

Length

1955 nt

Genomic location

chr2+:179641653..179644690

Exon number

2

Exons

179641653..179643482,179644565..179644690

Genome context

Sequence
000001 ATTTACTTTG CATCTTGTAG TGTCTCTGCC AGCTTTATTA ATAGCAGTCG CAGTATACCA GGCAGAATCT TGGCTGACAG 000080
000081 TGGAATCGAT TTTAAGGGCA GCTTCTCCCT TGGTTCCTTC AATTCTATAA AAAGTTGGGG GAGGGAATAA TCAATATAGT 000160
000161 GGTATAGCTT CCCTGGTTAT TGGATTTGTA TAATGAGCTT AGCTTTATTA TTTCCATACT TACCTGATTT TGGGATATTT 000240
000241 ATGAGGCACA ATGATGTCAC TGTTTTTCAA CCATACAATG TCAGGGTTGG GGTTACCCGT AGCTCTGACT TTCATTTCAA 000320
000321 GTCGGGAACC TTCCTTTATA TTGACATTTT TCAGTTTTTC TACAAACATC GGTTTTACCT GATGTTCCAC AGCTGAAAGA 000400
000401 GAAAGGTCAT GATTTAGAGG GAGTAAGGCT GAAATACCTG TTTATAACCC AAGTGATAAG AAAATTCATT TATTTTTATT 000480
000481 TTATCTCATT TTACCTTCCA CAGTTAAAAT CACTGAAATT GAAGATCTGC CTGCCCTGTT TTGGGCAACC ACAGTCCATT 000560
000561 CCCCAGAATC ACTGGGTGTG GCAGGGACAA TAATTAGTGA TTGAGTACCA TCTTCTTTAA TGACTACTTT ATGGGTATAG 000640
000641 TCATTGACAA TTTGCTGGCC TGTGAAAATA TGTTTAAAAG AAAGTAGATT TTAAAATAGT TTTTAAAAAT TGTTAGATGC 000720
000721 ATACATAAGC TTGTTTTTGT GTTTTTATGA TTCATGAGCA AAAACTTATC ACACTTACCA TCATGAAACC AGAACGTCTC 000800
000801 TGGCATAGGT CTACCAACAA CCTTTAAGTC AAATCTGGCA GTTTGCCCTT CTAAACATTT GAAAGAAACA GGTTTTAACA 000880
000881 CAAAGACTGG TTTATATAGT CTCTCAAGTT GTGACTCATC TGTCTCCTCC AGCCTACGTC CAGGGGACAT TCTTGCAGGG 000960
000961 GACATCCGTG CAGGAGACAT CCTTGCAGGT GACATCCGTG CAGGAGACAT GCGTATAGGA GACCTGCTCA CTGAACGTGG 001040
001041 AGAGAGAGAT CTGCAAAACA AAGACACACA ATACTTTCGT GAGGCATAAA GAAAACTCAG CAAAACAAAC TTCATTTTGT 001120
001121 CTTATTCATT ATTCATGTTA TTTTAGAATT TACTTCTTGC ACGTATTAGA AGGCACCTCA AACTCATTCA GATCTAAAAT 001200
001201 AGAATATATT ATTGTTGCCC CCACAACTAT GTTTTTCCTA TATTCTCAAT TTTAGCTGGT AGTCATTCAG TACATCCAGG 001280
001281 TACCCAGGCT CAAAAATCTT GGAATAATCC TCAATACTCT CTTTTCCTTA CCACTTGGAT TTAATCAGTC ACTAGACTTT 001360
001361 TTTGATTTAA CTACTAAAAC ATCCTAATAA ATGTTGGTTG GATAAGTAAA CCAATGAATA CATTTATGGA AAAATAAAAA 001440
001441 ATACACATTC TTTATCTCAG AGGAGGAAAA CATAGAAATG AATTTGGAAA CAAAACAAAG CAAAACAAGA CTCCATCTAC 001520
001521 ACATTGCAGC CAGACTGACT TGGAGTTTGA ATGCTGGCAC CACCGCTTAC AGGCTGGATG AATTAAGACA ATTTTCATAG 001600
001601 ATTCCCAGGG CCTCAGTGTT CCTATTTCCA AACCAATAAT AGTCATCTTT TTATTGCAGG GCTGTTGTAT AAATTTACAT 001680
001681 ATGTAAAAAT CAGGTGTCAA ATAAGAGCTA TTGTGATATT AGCTATAGCA CTAGGAAAAT AAACAGTATG TTACACTGAT 001760
001761 GAAAATTCTT TGCTCATCTT ACACAGGGGC AAGAAATAAA AACTTCTGGC AATTGTTGGT GTTGCCAATG GTGCAACATA 001840
001841 CCATGAAGAT TAAGGAAACT TAGCAACAGT GAACTTGGAC CTTCTAATAG CTGTCTAACC CCGAGCTCAT CACTTGAAAA 001920
001921 TGAAAATATC AAATAAAAAA AGGAAAGTAT AATTT
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Predicted Small Protein

Name NONHSAT075819_smProtein_746:826
Length 27
Molecular weight 3203.7816
Aromaticity 0.0384615384615
Instability index 51.6230769231
Isoelectric point 9.98443603516
Runs 5
Runs residual 0.0169946332737
Runs probability 0.0383854442678
Amino acid sequence MIHEQKLITLTIMKPERLWHRSTNNL
Secondary structure LLLLLLEEEEEELLHHHHHHHHLLLL
PRMN -
PiMo -