NONHSAT003499

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT003499

Source

NONCODE4.0

Same with

,

Classification

intronic(AS)

Length

516 nt

Genomic location

chr1+:58417944..58426519

Exon number

4

Exons

58417944..58418080,58422201..58422390,58425625..58425776,58426483..58426519

Genome context

Sequence
000001 gggaagagtc atctttgctc ataaagacaa tgggggatga tgaagcaata gaaagaagaa actgggttcc tggtgacttt 000080
000081 gttgagcaca gccacccttc ccatccagaC AGCCCAACAG CTCCACTCCT CCTTCCAgtc agcctcctgg ggcaggcaca 000160
000161 gaagggtgga gggaagacct cattaaataa agacatccag cacaCCAAAA CAGGCAGAAA GCAGACATGA TAACGAGATT 000240
000241 GCCACCTATT TACCTTCTTG TAACCATAAG AATGAGGGAA GCTTCATTCC GACGGAGTTC GACCAAAATA GAGAAGAAGT 000320
000321 TGTAAGGGCA ACCCTTGCAT AAAAATATCC ACTCACCAAC TGTTCACCAA CTGTTCTTCC TCTTGCTGGC ATACCTTATG 000400
000401 CAGCATCCTC AGATGCCAGA GCGCGTTTCT GCTGCAGCCT CCACGATGCC TGGGCTGATA GCAATCAGGT CCTGCTATGg 000480
000481 cctaagccat gcaggcatga ggagaacaga ccccag
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Predicted Small Protein

Name NONHSAT003499_smProtein_29:229
Length 67
Molecular weight 7182.9156
Aromaticity 0.030303030303
Instability index 49.9712121212
Isoelectric point 6.90045166016
Runs 11
Runs residual 0.0160587915079
Runs probability 0.0411025999261
Amino acid sequence MGDDEAIERRNWVPGDFVEHSHPSHPDSPTAPLLLPVSLLGQAQKGGGKTSLNKDIQHTK
TGRKQT
Secondary structure LLLHHHHHHLLLLLLLEEELLLLLLLLLLLLLEELLEELLLLLLLLLLLEEELLLLLLLL
LLLLLL
PRMN -
PiMo -