ENST00000447058.2

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

ENST00000447058.2

Source

Gencode19

Same with

lnc-ADAM22-2:1,NONHSAT121863

Classification

intergenic

Length

777 nt

Genomic location

chr7+:87858974..87861089

Exon number

2

Exons

87858974..87859275,87860615..87861089

Genome context

Sequence
000001 GAGATTTTCA AGCACATCTA GGAAGTATTT CAAAAGGTAA TTTAGGAAAA ATTTCAAAAG ATAATCTTTA GGCCCTTCAC 000080
000081 ATGCTCCTAT CTTCCAGGTT CTGGAAGCAG CTATCGCAAG TGCTTAAATG TTCCTCCTGT GACTCTGTGA CTGTCCAAAG 000160
000161 TCCCTGTTTC CAGTTCAGCT TTCTTTGAAA AGCCCTTGAG CTTTAATATC ACCATCATGC CTCATTAAAA CTCCTATTCA 000240
000241 CTGGGTGCAG AAGACTGCTT ATTACTGAAA GTAATTTGAC TAAAACATAA ATACTGCAAA ATCTGTCTAC ATACGTCTCT 000320
000321 TTGAAACAAC CTGAACTCTT CTCTCAATAT AAAATTGAGG TGAAATACCA AATTAAGGCA CATGGGTCCG TTATTGCCAA 000400
000401 AGTGATGGAT TTCCTGACAA CCATTCCACC CAGAAGATTT TTTTTCCCAG AACTAATAAT CCCATCCCCG TTGCTGGTGA 000480
000481 TTAACTTAAT AACGAGCATG ACAATCAACA AACAGATTGA AAAGGCAACC TACTCAGAAT GGGAGAAAAT ATGAAACCAT 000560
000561 ATACCAGAGA TGAAAGTAAT ATCCAGAATA TATAAAGAAT TCCTACAACT TGATAACAAA AACACCCCAA TCTAAAAATG 000640
000641 GACACAGAAT TTAAATAGAC ATTTCTCCAA TGAAGATGGC CACCACACAT GTGAAAAGAT GCTCAACATC ACTAATCATC 000720
000721 AAGGGAAATG CAAATCAAAA CCACAATAGC ACAATGAGAT ATCATTTCAG ACCCCGT
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Predicted Small Protein

Name ENST00000447058.2_smProtein_404:553
Length 50
Molecular weight 5796.8368
Aromaticity 0.122448979592
Instability index 58.706122449
Isoelectric point 6.07122802734
Runs 7
Runs residual 0.019194704909
Runs probability 0.00967774497186
Amino acid sequence MDFLTTIPPRRFFFPELIIPSPLLVINLITSMTINKQIEKATYSEWEKI
Secondary structure LLEELLLLLLLLLLLLEELLLLHHHHHHHHHHHHHHHHHHHHHHHHLLL
PRMN LLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLL
PiMo oooooooooooooooTTTTTTTTTTTTTTTTTTiiiiiiiiiiiiiiii