HDHD5-AS1

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Annotated Information

Approved Symbol

HDHD5-AS1 (HDHD5 antisense RNA 1）

Previous Symbols

"CECR4, CECR5-AS1"

Synonyms

NCRNA00017

Chromosome

22q11.1

Genomic structure of the genes in the CES critical region (CESCR). [1].

RefSeq ID

NR_024483

Characteristics

HDHD5-AS1 is adjacent to the human CES critical region (CESCR)[1]. The distance between HDHD5-AS1 and the adjacent gene CECR5 is at least 99 bp [1]. HDHD5-AS1 is considered to be an unprocessed pseudogene [1].

Conservation

The sequences of exon 1 of HDHD5-AS1 is conserved in human and mouse [1].

Function

HDHD5-AS1 can be seen as a candidate gene for involvement in CES [1].

Disease

cat eye syndrome

Expression

Gene name Probe used Size of transcript(s) in kb Tissues showing expression
CECR8 cDNA 1840041 1.4 Testis
CECR4 (HDHD5-AS1) cDNA 321686 7 Adult heart and skeletal muscle, all fetal  tissues tested
CECR3 cDNA 2.4 and 3.7 2.4 kb—predominantly in lung;  3.7 kg—weakly in all tissues

Labs working on this lncRNA

  • Department of Biological Sciences, University of Alberta, Edmonton, Alberta T6G 2E9, Canada. [1]

References

<references>

[1](1)
  1. ↑ 1.0 1.1 1.2 1.3 1.4 1.5 1.6 1.7 Footz, T.K., et al., Analysis of the cat eye syndrome critical region in humans and the region of conserved synteny in mice: a search for candidate genes at or near the human chromosome 22 pericentromere. (1088-9051 (Print)).
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