ENST00000608917.1
Revision as of 05:50, 13 October 2014 by 73.162.128.239 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000608917.1 |
Source |
Gencode19 |
Same with |
, |
Classification |
intergenic |
Length |
825 nt |
Genomic location |
chr1+:186649754..186650578 |
Exon number |
1 |
Exons |
186649754..186650578 |
Genome context |
|
Sequence |
000001 AATTTGGGAG CAGAGGGGGT AGTCCCCACT CTCCTGTCTG ATCCCTCCCT CTCCTCCCCG AGTTCCACCG CCCCAGGCGC 000080
000081 ACAGGTTTCC GCCAGATGTC TTTTCTTCTT CGCAGTCTTT GCCCGAGCGC TTCCGAGAGC CAGTTCTGGA CTGATCGCCT 000160 000161 TGGATGGGAT ACCGGGGGAG GGCAGAAGGA CACTTGGCTT CCTCTCCAGG AATCTGAGCG GCCCTGAGGT CCGGGGGCGC 000240 000241 AGGGAATCCC CTCTCCCGCC GCCGCCGCCG TGTCTGGTCT GTACGTCTTT AGAGGGTCGA GGAAGTCACG TCGGGACAGA 000320 000321 CTGGGGCGAG TAAGGTTAAG AAAGGCTGAC ATGTTTTATG TTTTAGTGAC GACGCTTAAT AGGCTGTATA TCTGCTCTAT 000400 000401 ATGCAGCACA TACATACATA GCTTTTTAAA AAACTCTTAT TTTGTGGAAT GAAATAGCTA CCTTCAGTGT ACATAGCTGT 000480 000481 AATTTATCTT TGTAGCTAAG TTGCTTTCAA CAGAAGAAAT ACTGTTCTCC GTACCTTCAC CCCCTCCTTG TTTCTTGGAA 000560 000561 AGAGAGGCGG GAAAGGTAAA TTCTCCTCAT AATACTGGTC CTAAGCAGTT ACCCTGTAAA TAGTTAATGT GAGCTCCACG 000640 000641 GGTCACCAAT ATAAAGTTTC CTGCCTTCTG ATGGACAAAG GAAGCGGCGA TGGCCAGAAT TTGCAGGGAC GCTAAATGTC 000720 000721 CAAAACGTAT GCCTTAAGGC ATTTCTCTCC CTGATGCGTG GATTATTTTG GTTACTAGCC CTTCATAGGA GATACTGGTA 000800 000801 AAATAAATTC GAGTTTTAAA GTTCA |
Predicted Small Protein
Name | ENST00000608917.1_smProtein_95:226 |
Length | 44 |
Molecular weight | 4914.4025 |
Aromaticity | 0.116279069767 |
Instability index | 79.0720930233 |
Isoelectric point | 4.59381103516 |
Runs | 5 |
Runs residual | 0.0410243010191 |
Runs probability | 0.0137078254725 |
Amino acid sequence | MSFLLRSLCPSASESQFWTDRLGWDTGGGQKDTWLPLQESERP |
Secondary structure | LLEEELLLLLLLLLLLLHHHHLLLLLLLLLLLLLLLLLLLLLL |
PRMN | - |
PiMo | - |