ENST00000587036.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

ENST00000587036.1

Source

Gencode19

Same with

NONHSAT113480

Classification

intergenic

Length

655 nt

Genomic location

chr6-:72012681..72037762

Exon number

6

Exons

72012681..72012748,72014051..72014093,72019999..72020076,72020253..72020345,72036033..72036323,72037681..72037762

Genome context

Sequence
000001 TGGGCAAGTT AGTTGCTCCA AAAACAAGAT AAAATGATTG AGTTCTTTTC TCAAGCGGGA GTCGGAGTTT ATCTGCTCTG 000080
000081 AGGGTCATCC AACTAAAAAA TATATATATC TTGAGGATTT GCATTGATAT TCAATATCGA CATATCCAAG GCCTCCCTCC 000160
000161 AGACCACTAG ATTCTAGTAA TTTGAACCGG CTTCTCCTCT CCCTCAAAGC AGCTCTGCTT AGTACAGTGC TTGGCACAAA 000240
000241 GCAAATATTC AATAAATGTT AGCCAACGTT AGCTGCTCAT CTGCTTTCCT TAAAAGCCAA GTCATTTCAA CAAACCACCC 000320
000321 CTGAGGCCCC AAGACACAGA AGAACAGCAT CCAGTCCAAG CCTTCTGGTG CAGAGCCCCA GCAGCTACTA TTAATGAGTG 000400
000401 TCTGGAATAT GTTCCTGGCA TTTCACCTAC CCTCTCTCCA ATCCTTCCAA GAAACTCACA AAGCAGGGCT TTTTCTTGAA 000480
000481 CTTCTCTTCC TCACAACAGT TAAATCATCC ATTTAAAGAT GTCAAACAAC CTCCGTGTTC TAAGAACTAT TTACTGAGCT 000560
000561 CTACGGAGAC ACAGCTACAA GCACCACATG CTGGACCCCT GAATATGGAG GGCCAACTAC ACTAGAAACA CACACGCTAG 000640
000641 CTGAGAAAGA TGGTG
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Predicted Small Protein

Name ENST00000587036.1_smProtein_518:556
Length 13
Molecular weight 1479.7461
Aromaticity 0.0833333333333
Instability index 77.8833333333
Isoelectric point 10.8344116211
Runs 4
Runs residual 0.0166666666667
Runs probability 0.0333200847908
Amino acid sequence MSNNLRVLRTIY
Secondary structure LLLLHHHHHEEL
PRMN -
PiMo -