NONHSAT003855
Revision as of 07:43, 13 October 2014 by 73.162.128.239 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT003855 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
530 nt |
Genomic location |
chr1-:70771369..70790640 |
Exon number |
4 |
Exons |
70771369..70771640,70771907..70771973,70781164..70781249,70790536..70790640 |
Genome context |
|
Sequence |
000001 AATGTGCCCA TTTACTTTTG GCTCACAATG CTCCAGTCAA GGTGAAAAAT GCTCAGGGAT GGAGCCCTCT GGCGGAAGCC 000080
000081 ATCAGCTATG GAGATAGGCA GATGATTACA GCTCTTTTGA GGAAGCTTAA GCAGCAATCC AGGGAAAGTG TTGAAGAAAA 000160 000161 ACGACCTCGA TTATTAAAAG CCCTGAAAGA GTGCCTTTAC TTTCCCGAAT TCTGCCTTCC GATGCATGTA AAATATACAA 000240 000241 ACAAGGTATC AATATCAGAC TATCCAGAAG GCAAACAGTG AGGATCTTGA TGTAATATTA AGAAGATTTA CAGTGGTTAC 000320 000321 CTTCCTGATC CTGGATTTAT TAAGGAATAA GGGACACATA AGGAAGACCC AATTCTTGCC TTTTTCTCCA TCTCTTTCAT 000400 000401 GTCTTTCCTT CCCCTGTTTA CTAATCCGTG TATCCGTTCA TCTGTTCATT CATTGATCTA TCCAATCCAG TGAATATTTT 000480 000481 GAGGCTAATT TTAATTTTCC TCATTCTGTT CCTTTTATAA CTAAGATTAA |
Predicted Small Protein
Name | NONHSAT003855_smProtein_101:280 |
Length | 60 |
Molecular weight | 7013.2363 |
Aromaticity | 0.0847457627119 |
Instability index | 79.2101694915 |
Isoelectric point | 9.46844482422 |
Runs | 9 |
Runs residual | 0.0080858342404 |
Runs probability | 0.0468017036646 |
Amino acid sequence | MITALLRKLKQQSRESVEEKRPRLLKALKECLYFPEFCLPMHVKYTNKVSISDYPEGKQ |
Secondary structure | LHHHHHHHHHHHLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLEEELLLEEEEELLLLLL |
PRMN | - |
PiMo | - |