NONHSAT003855

From LncRNAWiki
Revision as of 07:43, 13 October 2014 by 73.162.128.239 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT003855

Source

NONCODE4.0

Same with

,

Classification

sense

Length

530 nt

Genomic location

chr1-:70771369..70790640

Exon number

4

Exons

70771369..70771640,70771907..70771973,70781164..70781249,70790536..70790640

Genome context

Sequence
000001 AATGTGCCCA TTTACTTTTG GCTCACAATG CTCCAGTCAA GGTGAAAAAT GCTCAGGGAT GGAGCCCTCT GGCGGAAGCC 000080
000081 ATCAGCTATG GAGATAGGCA GATGATTACA GCTCTTTTGA GGAAGCTTAA GCAGCAATCC AGGGAAAGTG TTGAAGAAAA 000160
000161 ACGACCTCGA TTATTAAAAG CCCTGAAAGA GTGCCTTTAC TTTCCCGAAT TCTGCCTTCC GATGCATGTA AAATATACAA 000240
000241 ACAAGGTATC AATATCAGAC TATCCAGAAG GCAAACAGTG AGGATCTTGA TGTAATATTA AGAAGATTTA CAGTGGTTAC 000320
000321 CTTCCTGATC CTGGATTTAT TAAGGAATAA GGGACACATA AGGAAGACCC AATTCTTGCC TTTTTCTCCA TCTCTTTCAT 000400
000401 GTCTTTCCTT CCCCTGTTTA CTAATCCGTG TATCCGTTCA TCTGTTCATT CATTGATCTA TCCAATCCAG TGAATATTTT 000480
000481 GAGGCTAATT TTAATTTTCC TCATTCTGTT CCTTTTATAA CTAAGATTAA
[back to top]

Predicted Small Protein

Name NONHSAT003855_smProtein_101:280
Length 60
Molecular weight 7013.2363
Aromaticity 0.0847457627119
Instability index 79.2101694915
Isoelectric point 9.46844482422
Runs 9
Runs residual 0.0080858342404
Runs probability 0.0468017036646
Amino acid sequence MITALLRKLKQQSRESVEEKRPRLLKALKECLYFPEFCLPMHVKYTNKVSISDYPEGKQ
Secondary structure LHHHHHHHHHHHLHHHHHHHHHHHHHHHHHHLLLLLLLLLLLEEELLLEEEEELLLLLL
PRMN -
PiMo -