NONHSAT004831

From LncRNAWiki
Revision as of 08:15, 13 October 2014 by 73.162.128.239 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT004831

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

707 nt

Genomic location

chr1+:101529170..101551174

Exon number

3

Exons

101529170..101529195,101549017..101549130,101550608..101551174

Genome context

Sequence
000001 CACCTAATAA GAGTAAAGGC AAAGAGCCTC TCAAGCACTG TGAAAAATCA CTTTCTCTTG TTGTATTCTT GGAGCCCCTG 000080
000081 CTAATTCATT ATTGAAAAAT ACCTGCTGCC TGCATTTGGC CTTATGTTGT CATTTACTTG ggtctgtgca tggcgtttag 000160
000161 aaggctacac cttaggctgg gggtcaagaa tgtcttccct gatgtgaggt ttacacagag atctgaagaa tgaagagtcc 000240
000241 agctaagtta agtgggagcg gattaaggga atgcaaggac atgaaagagt gtcctaggca gagggaacaa catatacaaa 000320
000321 ggccctgagg tgggagtgaa caaggaactg agagaagaac tgagagaagg ccactgtggA AAGCCAGATG CTGTGTGACA 000400
000401 TGAATAATGG GACACAGGAA ATTGAGATAT TAGCAAAAGA GAGATTGATG ACCCATAGGC TTGAAGATGT ACTGGAACTA 000480
000481 AAGTAAGGGG CGAGGATAAA TAAAAAGAGG GAGAAATTGG AGAAACAGAG TGCTTGGAAG CCCTGATGAA TTTGAGGAAA 000560
000561 AGGATGGTGA TAGAGTTGAC CTAGCCAGCT AGAAGAGTAG TACTTTTTAG TCAGTGAGCC CTCCATCCCA TTTCTCATTA 000640
000641 ATTCTTGTAA CACTTTCTCA CTTCCTATAT TCTGTCATAT TTTATAGTTG TTTATATAAT TATCTTA
[back to top]

Predicted Small Protein

Name NONHSAT004831_smProtein_149:232
Length 28
Molecular weight 3302.8114
Aromaticity 0.111111111111
Instability index 78.5111111111
Isoelectric point 11.4176635742
Runs 5
Runs residual 0.0214707461084
Runs probability 0.0409291644586
Amino acid sequence MAFRRLHLRLGVKNVFPDVRFTQRSEE
Secondary structure LHHHHHHHHLLLLLLLLLLLEEELLLL
PRMN -
PiMo -