NONHSAT029454
Revision as of 08:35, 13 October 2014 by 73.162.128.239 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT029454 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
773 nt |
Genomic location |
chr12+:72425094..72556932 |
Exon number |
6 |
Exons |
72425094..72425171,72436605..72436664,72441336..72441437,72467373..72467499,72469260..72469488,72556756..72556932 |
Genome context |
|
Sequence |
000001 ACAGGAATGC CTTATCACCA CCTTCCAGGA AGCCTACTTT GTTTCAGAAA GTTTTGAAGA AGCCAAAGAA AAGATGAGAT 000080
000081 GGGATTTTTC TACTTACCCA TATGCATGAT GGAATATGGT GACTTTATAA CTTCTGAGGT ACAGATTGGC AATATGGCCC 000160 000161 GTACAAGCAC TGTTTGGGGT GCTGTTGTTA CAGAAACACA ACTGATGTCT CCTAGGGGTG GTAAGACAAC AGGATAAGTG 000240 000241 AATTCTTTAT CTAACAGGTA ATAACTCAAA TGCTTCGTCA AAGGCTGGTT TTCCAGGCCT GTTGGAGACA GACCACTTGG 000320 000321 ATAAGAAACA GTCAAGAGAC TTTATCATCT GTTTCTCCCA TGTCCAACtg ctgtggaatg aactgggtgc ctccagaatt 000400 000401 cccaactgaa gccctaactt gcagtgtgac tgtatttgga aataggacct gcaggaagta attaagccta agtgaggtca 000480 000481 taagggtagg gcgctaatcc gataagtctg gtgccttatg agaagaggaa gagacaccag agctgtcttt ctaccatgtg 000560 000561 aggacacagc gagGCTTGTT ggtgttgatt acatggctct aggaactgtc tgagaatcaa ggaatttcta caactgttct 000640 000641 cgaaaaagct gtcatctttt gtagcctcaa gactaattta gatggaaatc agatggaaag cctgatgctg cagtttgttg 000720 000721 aattataagg taggttgaat ttacagtttt accatttgtt tttcaaaaaa ttg |
Predicted Small Protein
Name | NONHSAT029454_smProtein_269:460 |
Length | 64 |
Molecular weight | 7285.3779 |
Aromaticity | 0.0952380952381 |
Instability index | 60.0841269841 |
Isoelectric point | 9.13299560547 |
Runs | 12 |
Runs residual | 0.0455134434726 |
Runs probability | 0.0261511511511 |
Amino acid sequence | MLRQRLVFQACWRQTTWIRNSQETLSSVSPMSNCCGMNWVPPEFPTEALTCSVTVFGNRT CRK |
Secondary structure | LLLEEEHHHHHHLLLEEEELLLEEEEEELLLLLLLLLLLLLLLLLLLLEEEEEEEEELEE EEL |
PRMN | - |
PiMo | - |