NONHSAT076398
Revision as of 06:36, 13 October 2014 by 73.162.128.239 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT076398 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
424 nt |
Genomic location |
chr2+:202316457..202323546 |
Exon number |
4 |
Exons |
202316457..202316661,202319469..202319575,202322102..202322173,202323507..202323546 |
Genome context |
|
Sequence |
000001 GAATGCGTTC CCAGCGGGTA GCCTGGGACT GGTGCAGAGT TCCAAGCCCA cggccccggt cgcggcctcg ccgccctccc 000080
000081 gcgccccgcg ccgggagcgg gccTAGAGCG CTCGCCTCGC CCCTCCGCGA GCAGGGCTCT GGCGCCCGCC CCTGTCCGCA 000160 000161 CCGCTGGCAG CCTGAAGAGA GTCGCTGGCC GTGGTCGCCG CTAGGTAGGA TATATCTGCA TCTTGAAAGG AAGATAAAAC 000240 000241 AAAAGCCTTC TTTGGAATAG ATGGATTTTT GTCACTTTCT GTGTGAACTA AAGTGATTCA ATGTCTCTTT TGGAAGCCAT 000320 000321 TAGAAACTCT GCAGAGGAAT CAGTTGTACA GCTATCTTGA CATTGTTAGC GTCTATTCTT CAGGGATTGC TTCTGCACTT 000400 000401 CAAGAACACA AGTTGAATCA CTCA |
Predicted Small Protein
Name | NONHSAT076398_smProtein_2:259 |
Length | 86 |
Molecular weight | 9936.3311 |
Aromaticity | 0.0705882352941 |
Instability index | 94.9611764706 |
Isoelectric point | 11.785949707 |
Runs | 10 |
Runs residual | 0.0188948306595 |
Runs probability | 0.0228758169934 |
Amino acid sequence | MRSQRVAWDWCRVPSPRPRSRPRRPPAPRAGSGPRALASPLREQGSGARPCPHRWQPEES RWPWSPLGRIYLHLERKIKQKPSLE |
Secondary structure | LLLHHHLHHHLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHLLLLLLLLLLLLLLLLL LLLLLLLLLEEEHHHHHHLLLLLLL |
PRMN | - |
PiMo | - |