NONHSAT096726
Revision as of 05:49, 13 October 2014 by 73.162.128.239 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT096726 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
675 nt |
Genomic location |
chr4-:69054121..69083722 |
Exon number |
3 |
Exons |
69054121..69054474,69071594..69071815,69083624..69083722 |
Genome context |
|
Sequence |
000001 ACATTTACCA GAGAAGCACT GATCAGGACA AAAGAAGTGC AGAACTTTTC TTTATATTTA TTTACTTCAA CAGCCATTAT 000080
000081 ATCAGCACAT TATGTATAGG TTACCTTCAG CAAGTTGCCT TAGCTGGAAG ATTGGAACAT ATACAATAAA AATGTCACAA 000160 000161 TTGTATGATT TCACTtttat ttatttattt atttatttTT Gtttattttt ttattatact ttaagtttta gggtacatgt 000240 000241 gcacaacgtg ctagtttgtt acatatgtat acatgtgcca tgttggcatg ctgctcccat taactcgtca tttaacatta 000320 000321 gCTGCATGCA TACTGTCACC AAGCAAATAT AAGAGGATGG ATGGTCCTGT GCTTAACCTA AAGGTACTCC ACAAACCCAC 000400 000401 AAAAGAGCAG AAGAAACCAA GCTATGAAAG ATCAGACAAA GAGGAAGAAA ATGCTGTTTT CAGCAACATA TGAAAACTTT 000480 000481 ATGTTGTTTC CAGTCCTGAT AACAACAGAG TGACAGCACA TATATGGCTG GTATTCAAGG GTCCAAGATC AATGAAAGAA 000560 000561 AACACAAGAA AAAGAATTGA AAGTATCTTA CATCAGATGC TGAAGAACCA CTCAGGATCC TTGACTACAG ATCTGAATTC 000640 000641 TCTGAGGCTT ATGGGTAAGC TCATGATGGG AGTGG |
Predicted Small Protein
Name | NONHSAT096726_smProtein_272:472 |
Length | 67 |
Molecular weight | 7535.8126 |
Aromaticity | 0.0454545454545 |
Instability index | 71.6787878788 |
Isoelectric point | 9.30120849609 |
Runs | 7 |
Runs residual | 0.0445472690982 |
Runs probability | 0.0349382996442 |
Amino acid sequence | MCHVGMLLPLTRHLTLAACILSPSKYKRMDGPVLNLKVLHKPTKEQKKPSYERSDKEEEN AVFSNI |
Secondary structure | LLLLLLLLHHHHHHHHHHHHLLLLLLLLLLLLLLLEEEELLLLLLLLLLLLLLLLHHHHH HHHLLL |
PRMN | - |
PiMo | - |