NONHSAT102795

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT102795

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1184 nt

Genomic location

chr5-:92746502..92916953

Exon number

6

Exons

92746502..92747215,92774409..92774447,92889467..92889569,92890580..92890701,92899070..92899169,92916848..92916953

Genome context

Sequence
000001 CCCTCGACTC GCGAGGGCGT AAAAGTTTGT CTCAGCTCGA GCATTCCTAG CGCCAACACG CCCTCAGGTA AAGGTGGAAG 000080
000081 TAAATGGCCA CGCTGTATTG ACAGAGCAGG TAGATGAAAC TCAAGAGAAA AGGTGTGGAT AAATGAAACT AGCCCATGAT 000160
000161 GAACCTGTTT TCTCCGTGAC CACAATATTA ACCAGGATGA ATGGCGGTGG CAGTGGGCCT GCATCACAGG TTGCAGCAGA 000240
000241 TGTTCTCAAT ATTTCTATTA AAATTTCCTT ATTTCCATAT GCAAGAGGAG CCCCAGAGCT GCATCCTTAT GGTAGCTACC 000320
000321 ATGCCGTGAT GTAAGCTGCC ATTCACTGGG GAGCTTTGGC AATAGAATTG GCTAGATCAG GAAGCCTATG TCAACTATGG 000400
000401 AACAACAACT TGCAGCTCAT CTCTATTGAT GGTGAAACAG TCGCAAATGG AATTCCAAGA AACATTCTAT ATACACTGCC 000480
000481 TCTAGGACTG GGACAGATAG CCACTGAGTA CCTGCTTCAA ATCACCCTGC ACGTTTTCTC TTTGGAAAGA TAAGCACTGG 000560
000561 AGAACCATCT CGTTACCTTC AGCAGAAATG GAAACAAATC AAGACATTAA GAATGCCGCA GTGGACAGCA GTTATGCAAG 000640
000641 GTTCAGCAGA GGAAGTTTTC AAGATGGTGT GCCTCACTAG CCAGAAATCA GAAAAGATCG AAGCTAGCCT TTTCATCTCA 000720
000721 GCTGCTCCTT AAATCAGTGC AACCCCTCCA AATTAATGTG AATTGAAACT TGCATTGCTT TTCAACTTAA TTGAATACTT 000800
000801 ACTATATGTG AACCACTGCA CAAAATAGGG GAAGAAGATG TGGGAGACAA AGATGTGGAG CCTGTCTTCA ATAAATTTAC 000880
000881 AGTTAGTTTC AGGGTACATT GTTTTTCTTC TGCTGTTAAT TAGGTGTATC CCCAAGACAA TAAATACATG AATGGAAAAG 000960
000961 TATATTCTGT GTTTTAAGTC TCTTTAATAA AAAACAAAAC AAAATCCAAA AAAACTCCTA ACATGGCAAC TCAGGACATT 001040
001041 TTAATCCTTT TTTTTGTTGT TGGGCTTCTG ATAGGATCCA TTTTATTGAT TCCATAAATA TTTAGTAGAC TTTAGACATA 001120
001121 TTAATACATT GTAGTTTGAG TTAATTTGCA TTAAATTCTG TTTTTTTCCC CTTAGGTATA GATT
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Predicted Small Protein

Name NONHSAT102795_smProtein_200:328
Length 43
Molecular weight 4921.9126
Aromaticity 0.119047619048
Instability index 78.5857142857
Isoelectric point 6.80682373047
Runs 7
Runs residual 0.00949367088608
Runs probability 0.0212986095339
Amino acid sequence MAVAVGLHHRLQQMFSIFLLKFPYFHMQEEPQSCILMVATMP
Secondary structure LHHHLHHHHHHHHHHHHHHHLLLLLLLLLLLLEEEEEEEELL
PRMN -
PiMo -