NONHSAT113519
Revision as of 01:55, 17 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT113519 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
454 nt |
Genomic location |
chr6+:72217258..72225298 |
Exon number |
4 |
Exons |
72217258..72217330,72219428..72219518,72224903..72225095,72225202..72225298 |
Genome context |
|
Sequence |
000001 ACGTTTCCTA CTAGCCTGTA AACTGAATAT AGGCTAAAAA GGTAGAACTA TTAATAAATT TAGACCTTAA TATGTAGACA 000080
000081 TTTACTTTTC TGTTACTATG TATAATGTGT ATATATATAT ATAAAATACA GGCTGCTAAG TGTATTGTCC ACTATGAGGA 000160 000161 CCAAACTGCA CTCCAGCCGG GGCAACAGAC AGAGACGCCA TCTCAAAAAA AAAAAAAAAA AAGGAAAGTA AGTAATCAAA 000240 000241 CAAGAAAGGT ATGTGGGACA CACAGCAGAC AAAAGATTAG TAACCAGAGT ACATAGAGAG CTCTTACACT CCTACAGTCA 000320 000321 ATGAGAAAAA GATTTAAAAT CCAATGGAAA ACGAGCATCA ATTTTCAAAC TATCAGAAAG ACCAAAATTA AAAGTTTAAC 000400 000401 AATGCCAGCT GTTGGTAAGA ATATAAATTG TCATAACTAC ATTGGAGAAT AGTT |
Predicted Small Protein
Name | NONHSAT113519_smProtein_104:295 |
Length | 64 |
Molecular weight | 7267.3169 |
Aromaticity | 0.047619047619 |
Instability index | 46.9206349206 |
Isoelectric point | 9.96856689453 |
Runs | 11 |
Runs residual | 0.0296404275996 |
Runs probability | 0.0299657946717 |
Amino acid sequence | MCIYIYKIQAAKCIVHYEDQTALQPGQQTETPSQKKKKKRKVSNQTRKVCGTHSRQKISN QST |
Secondary structure | LEEEEEEEEEEEEEEEEELLLLLLLLLLLLLLLHHHLLLLEELLLLLEEEELLLLLEEEL LLL |
PRMN | - |
PiMo | - |