NONHSAT118117

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT118117

Source

NONCODE4.0

Same with

,

Classification

antisense

Length

777 nt

Genomic location

chr6_qbl_hap6-:3196019..3203284

Exon number

3

Exons

3196019..3196202,3196910..3196972,3202755..3203284

Genome context

Sequence
000001 gcctagccaa catggcgaga ccatgtctct actaaaaata caaaaatttg ccgggcatgg tggcacatgc ctgtaatccc 000080
000081 agcttcttgg gagactgagg cacgagaatc acctgaaccc aggaggcaga ggttacagtg agccgggatc ccgccactgc 000160
000161 actgcagcct gggcttctgg gtgacagagc gagactctgt ctcaaacaaa tgaacagaaa aagaagaaag gaaTTTGGAC 000240
000241 ACAAAGACAC AGGTAGTGGG TCTCCTATCT ATATAAGAGA ACAGCATGTA ATgacacaga ggcacacaca gaaaagaagg 000320
000321 cgagttgaag acagaggcag agaatgggtt tatgctgccg caagccaagg ttggagctgc cggcagccgg aaaaggcagg 000400
000401 aaagaattct tcccaagagc cttctgagga agcacggccc tgccaacacc ttgatttcag acttctaacc tccagaactg 000480
000481 taagaaaaag aaattctgtg ttctaagcca cccaggtttg tggtagtttg ACTCtcttca ctccaccctg tgaggggcat 000560
000561 gatgacccct attttatgga taaggaaact gagGGGCAcc agtatttttc tgcttcactc ctgtgggtta tctcactacc 000640
000641 tttctgtgga gaccactgtt ctagatgatg aattcctgga aagtaagacc tcagcctttc catctttgct gtcgcccagc 000720
000721 cccagcacag tgtcccaaca gtgcttgtgg aataaaaatt atgattgtat aaattga
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Predicted Small Protein

Name NONHSAT118117_smProtein_209:505
Length 99
Molecular weight 11625.9179
Aromaticity 0.0714285714286
Instability index 72.206122449
Isoelectric point 10.868347168
Runs 12
Runs residual 0.0165935533092
Runs probability 0.0413060118943
Amino acid sequence MNRKRRKEFGHKDTGSGSPIYIREQHVMTQRHTQKRRRVEDRGREWVYAAASQGWSCRQP
EKAGKNSSQEPSEEARPCQHLDFRLLTSRTVRKRNSVF
Secondary structure LLLLLLLLLLLLLLLLLLLEEEEEEEEEEELLLEEEEEEEELLLEEEHHHHHLLLLLLLL
LLLLLLLLLLLLLLLLLLLLLLEEEEEELEEEEELLLL
PRMN -
PiMo -