NONHSAT119744

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Revision as of 06:23, 13 October 2014 by 73.162.128.239 (talk)
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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT119744

Source

NONCODE4.0

Same with

,

Classification

sense

Length

591 nt

Genomic location

chr7+:27779788..27797970

Exon number

3

Exons

27779788..27779888,27788137..27788305,27797650..27797970

Genome context

Sequence
000001 GGGGGTAGGC GGTAGTGGCG GAAGAGGTTC GGCGGCTGAT GGCGGATCAG GATCGGAAGC CTGCGTAACT TTCTCCCTTG 000080
000081 ATCCGGGAGT CTTTCCACTG GATTCACAAT GACATCCTTT CAAGAAGTCC CATTGCAGAC TTCCAACTTT GCCCATGTCA 000160
000161 TCTTTCAAAA TGTGGCCAAG AGTTACCTTC CTAATGCACA CCTGGAATGT CATTACACCT TAACTCCATA TATTCATCCA 000240
000241 CATCCAAAAG ATTGGGTTGG TATATTCAAG GTTGGATGGA GTACTGCTCG TGATTATTAC ACGTTTTTAT GGTCCCCTAT 000320
000321 GCCTGAACAT TATGTGGAAG GATCAACAGT CAATTGTGTA CTAGCATTCC AAGGTAAGGA CTGAAAACTG CAGAACTCAA 000400
000401 TGAAACTAGA TGTCTTATTG CCATTAAAGA TGTTGTACTC CATTGtaatg atttgttcag gtatctccag ggtaccaaag 000480
000481 ttgaattAGT TAGTGTCTTT ACTTAGCAAA AGCCCTAAGA ATGTAACTGT CTGGTGTAGG CCACATGATA TTTTATGTAG 000560
000561 ACATTTAAAA GTTATTGGTT GTTGTCTTAA C
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Predicted Small Protein

Name NONHSAT119744_smProtein_206:292
Length 29
Molecular weight 3341.791
Aromaticity 0.178571428571
Instability index 61.1285714286
Isoelectric point 7.93890380859
Runs 5
Runs residual 0.0246478873239
Runs probability 0.000830242006712
Amino acid sequence MSLHLNSIYSSTSKRLGWYIQGWMEYCS
Secondary structure LEEELLLHHHHHHHHHHHHHHHHHHHLL
PRMN -
PiMo -