NONHSAT129620

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT129620

Source

NONCODE4.0

Same with

,

Classification

sense

Length

548 nt

Genomic location

chr8+:144766651..144773563

Exon number

4

Exons

144766651..144766712,144771374..144771471,144772227..144772293,144773243..144773563

Genome context

Sequence
000001 AAAAGTCTGG GCTACCGGCG CGGCGTAGTG GATGCAGCAT CCTAGTGGAG GACGCCCCTG TGttgctgaa cctgtttgca 000080
000081 tgagttgctc ctgacggccc tttaggatac ttccatgtct gtagggtcta gagtgacatc tcctCCCCTC CCCTGACGAG 000160
000161 ATCTGCCCTC CTTGGCACTG TGCTTCCCCA GAGGGGTGGC CTCGCTGTTC CCATGGACAT GGCCCAGGAG CCAGTGACCT 000240
000241 TCAGGGACGT GGCCATCTAC TTCTCAAGGG AGGAGTGGGC GTGTCTGGAA CCCAGCCAGA GGGCCCTCTA CCGGGACGTG 000320
000321 ATGCTGGACA ACTTCAGCAG TGTGGCTGCT CTGGGTGAGC ACGGGCTGAG CGCAGCGTGA GCACAGGGTG AGTGCTGGGA 000400
000401 GAGCTCTGCC GCTGCCTCTG GGCCCAGCTC GTCCAGGACA GTAGTGGGGC CTCCCAGCTG AGGGGGCTCA GGAGCTAGAA 000480
000481 GTTATTGGCT TATGTAGACA GAGGGGCCCA CTCAGCGTTT CTCTCGGGCT CCCTGGAGGC AGCCTCAT
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Predicted Small Protein

Name NONHSAT129620_smProtein_212:379
Length 56
Molecular weight 6195.9028
Aromaticity 0.109090909091
Instability index 42.2945454545
Isoelectric point 4.39508056641
Runs 11
Runs residual 0.0484848484848
Runs probability 0.0244977597919
Amino acid sequence MDMAQEPVTFRDVAIYFSREEWACLEPSQRALYRDVMLDNFSSVAALGEHGLSAA
Secondary structure LLLLLLLLEEHHHEEEELLHHHHLLLHHHHHHHHHHHHLLLHHHHHHHHLLLLLL
PRMN -
PiMo -