NONHSAT133468
Revision as of 12:05, 13 October 2014 by 73.162.128.239 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT133468 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
831 nt |
Genomic location |
chr9+:99883941..99884771 |
Exon number |
1 |
Exons |
99883941..99884771 |
Genome context |
|
Sequence |
000001 ATGAGGGACA GAAGAGGGCC CCTCGGCACC TGCCTGGCAC AAGTGCAGTG GGCCGGAGGA GGTGACTCGG ACAAACTGTC 000080
000081 ATACAGCCTT AAGCAAAGAA TGCCGATGGA GGGCCCTTGG CCTGCAGATG CACCCTCCTG GATGAATAAG CCTGCGGCTG 000160 000161 ATGGAAATTC AGAGTGAGGC ATTATCACTG GAAATGAGAA AGGATCCGAG CAGGGCTGGC CTCTCGCTTC CCAGTGGCGG 000240 000241 CCCAGTTCTT CCATATGTGA AAGAATCAGT AAGAAGAAAT CCAGCCTCAG CAGCCACTCC GAGCGCAGCC GTGGGTTTGT 000320 000321 TCCCTGCTCC AACAGAGTAT TTTGCTCGGG TGTCCTGCAG TGGTGTTGAA GCTCTGGGGC GGGACTGGCT GGGAGGAGGG 000400 000401 CCCAGGGCCA CCCACGGCCA CAGAGGACAG TGCCCCAAAG GAGAGCCTCA GGTGTCACGA CTGCCATGCC ATCAAAAACT 000480 000481 GCCGGAAATG GGAAGTTTTC AGGATGACCC ACCAAGTGCT TTTCCCAAGG GTCTGCGCTC TGAGTTGGAA CCCTCTTGCC 000560 000561 TGCATTCCAT CCTGTCTGCA ACACTGCAGG CGTGTCCCGA AGAGCTCCTG AATGACGAGA CAAAACGCAT TTTCCTTGAC 000640 000641 CGTTTAAACC CCATGTTTTC AAAGCAAACA ATAGAATTCA AAAAAATGCT TAAAAGTACC TCAGATGGTC TGCAGATAAC 000720 000721 ACTGGGGTTA CTGGCTCTGC AACATTTTGA ATTAGCAAAT TCATTATGCC ATAGTTAAGG TACAAGCAGA ACAATACAAG 000800 000801 TAGATTAATT TTAAGAGTTG TCTTAGAATG A |
Predicted Small Protein
Name | NONHSAT133468_smProtein_503:610 |
Length | 36 |
Molecular weight | 3979.7463 |
Aromaticity | 0.0571428571429 |
Instability index | 81.5257142857 |
Isoelectric point | 9.37188720703 |
Runs | 7 |
Runs residual | 0.0188861985472 |
Runs probability | 0.0436318671612 |
Amino acid sequence | MTHQVLFPRVCALSWNPLACIPSCLQHCRRVPKSS |
Secondary structure | LLLEEELLLLEELLLLLLLLLHHHHHHHHLLLLLL |
PRMN | - |
PiMo | - |