NONHSAT134505

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT134505

Source

NONCODE4.0

Same with

,

Classification

sense

Length

549 nt

Genomic location

chr9-:123151474..123163297

Exon number

4

Exons

123151474..123151570,123152019..123152065,123156790..123156916,123163020..123163297

Genome context

Sequence
000001 ATGTGGTACC AGGCTTTCGC TCAGCGTGTG AAACAGAAGC CCTACAGTCT GGAGATTTAT ACTGCATGTT AAGGCTTGCT 000080
000081 TGTCTAAAAT CTTTTTCAAG ACTGCACGTA ACAGCCTTCA TATCCCCCGT GTAGGGTCCA CACCCAGCAC CACTGAGCAA 000160
000161 GTTTGTGAGC AGTGTGAGCA CGGCCAAGCT GACCCTGGAA GAGGCCTACA GGCGGCTGAA GCTTCTCTGG AGAGTCTCAC 000240
000241 TCCCCGAGGA TGGCCAGTGC CCCCTTCACT GTGAGCAGAT TGGAGAAATG AAGGCAGAGG TCACCAAACT ACATAAAAAA 000320
000321 TTGTTTGAAC AAGAAAAGAA GTTGCAAAAC ACCATGAAGC TTTTGCAGCT GAGCAAGCGC CAGGAAAAAG TCATCTTTGA 000400
000401 TCAATTGGTC GTAACCCACA AAATCCTTCG GAAGGCCAGA GGAAACCTGG AGCTTAGGCC TGGGGGAGCC CATCCAGGAA 000480
000481 CATGCAGTCC CAGCAGACCA GGCTCCTGAG AAGAACTTTC AGCCAATAAA GCTTGTGCTT CCCCCACCG
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Predicted Small Protein

Name NONHSAT134505_smProtein_287:508
Length 74
Molecular weight 8303.7391
Aromaticity 0.027397260274
Instability index 51.4931506849
Isoelectric point 10.4088745117
Runs 9
Runs residual 0.0208572691118
Runs probability 0.0226402873462
Amino acid sequence MKAEVTKLHKKLFEQEKKLQNTMKLLQLSKRQEKVIFDQLVVTHKILRKARGNLELRPGG
AHPGTCSPSRPGS
Secondary structure LLHHHHHHHHHHHHHHHHHHHHHHHHHHLLLLLLHHHHHHEEHHHHHHHHLLLLEELLLL
LLLLLLLLLLLLL
PRMN -
PiMo -