NONHSAT136935

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT136935

Source

NONCODE4.0

Same with

,

Classification

sense

Length

585 nt

Genomic location

chrX+:48373830..48374617

Exon number

3

Exons

48373830..48374181,48374278..48374341,48374449..48374617

Genome context

Sequence
000001 tgggagtttg gggagggcaa atcaagggta attcccaggt ttttgccctg aggaactgga aacgtggagt tgacattgac 000080
000081 tgaacttgat gagactggga ggagcaggct gggaagatcg ggagctgggc tttgggcatg tgaagtttga gGCCATCTAA 000160
000161 GGACTTTATC CTGGGGGCTC CAACAGGTTG TGGGTATTCT CATCCTGCTG ATGGCCCTCC AGGAGGGGCT GGGGGACTTT 000240
000241 CAGGAGAATT TTATCCCACA TCTCTTCCCC TCCAGATGTT TTCAAGAATG CTCTCCGCCT GGGGACCTTC TCGGCTGTGC 000320
000321 TGGTCACCTA TGCAGCCAGC GCCCTCCTAC ATGGCTTCAG TTTCCACCTG GCTGCGGTCC TGCTGTCCCT GGCTTTTATC 000400
000401 ACTTACGTGG AGCATGTCCT CCGGAAGCGC CTGGCTCGGA TCCTCAGTGC CTGTGTCTTG TCAAAGCGGT GCCCGCCAGA 000480
000481 CTGTTCGCAC CAGCATCGCT TGGTGAGGGT TCAGCCTGGG CAACCTTGTG CCCAACACTC CCTGTCAAAA ATGTTCCTTC 000560
000561 TATCTCTATC TTGTATGTGT CTCAG
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Predicted Small Protein

Name NONHSAT136935_smProtein_275:505
Length 77
Molecular weight 8376.6549
Aromaticity 0.118421052632
Instability index 82.6526315789
Isoelectric point 9.87884521484
Runs 14
Runs residual 0.0428009679371
Runs probability 0.0484770484771
Amino acid sequence MFSRMLSAWGPSRLCWSPMQPAPSYMASVSTWLRSCCPWLLSLTWSMSSGSAWLGSSVPV
SCQSGARQTVRTSIAW
Secondary structure LLLHHHLLLLLLLLLLLLLLLLLLHHHHHHHHHHHLLHHHHHEEEELLLLLEEELLLEEE
ELLLLLEEEEEEEEEL
PRMN -
PiMo -