NONHSAT142180
Revision as of 06:55, 13 October 2014 by 73.162.128.239 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT142180 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
913 nt |
Genomic location |
chr16+:34581756..34582668 |
Exon number |
1 |
Exons |
34581756..34582668 |
Genome context |
|
Sequence |
000001 CCGTGTATTA GAGTAATTGT CATTAGATCA CCTGTGTTGC ATACAGGGTC ACTCTTTATC ATTACTGCTG TAAAACCTGT 000080
000081 GGCAATTGGA AGAGAAAATG ATCCTGAGCA TACTCTTTGA ATCCCTGAAG TTGGTGTCAG TAAGTTTCAT GCAGAAATTT 000160 000161 ATTTTGACCA TGACTTACAA AGTTATGTCC TTGTAGATCA AGGCAGTCAA AAGAGAACAG TTGTTAATGG AAAATGGATT 000240 000241 GTTCAACTGG AAATTAATGT GACCCTTATG TACTTGAGCA TAGTCATGAA CTGAAAATTG GAGAGACTGT GTTACCCTTT 000320 000321 TACACTCATC CTAGCACTGA TACCTGGGCT GGCTGTGAAC CACGACAAGT TAGAGCTCAC CCTTGCCTTG ATAAGAAAGA 000400 000401 TGAATTGTTA ATTGGACCAA CTCTAAGCAA GGAGAAAAAA TAGTTGGAAA TAAGAAAATA ATTAAAGAAA ATACAATTAA 000480 000481 AATATGTTTA CAGAAACAGA CTATGAAGAT AAATAGACAT TGAAGAATCT AAAATATAAA AATAGAGGTG GAAAACATAG 000560 000561 TGAGCAGATT GGAAGTGAAG GAACCTTCCG AAGAGATAAT TCTCCTACAT CTGTTCATTC TGAAATTACC AACAGCAACA 000640 000641 AAAGTAAGAT GTTGCAGAAG ATGGGTTGGA TAAAAGGTGA GAGCCTGGGG AACGATGGCT GGGAATGAAA ACTCTGATTC 000720 000721 AGCTTCAGCT TCAGCGAACA CCTGTAGGCT TGGGGACAGG CAATCCATCC TCATTTGAAG ATGTTCACCT TCTCCAAAAC 000800 000801 AAAAACAAAC ATACTGGGAC AAAGCATGAG ATAGGTTTGC TGAAAACTTC CCAGAAACTA AACGTTAAAA AAATGACCCA 000880 000881 GGGACCATGA CTTGGGTAAA AGGGACTGTA GAG |
Predicted Small Protein
Name | NONHSAT142180_smProtein_704:889 |
Length | 62 |
Molecular weight | 6763.8033 |
Aromaticity | 0.016393442623 |
Instability index | 42.8983606557 |
Isoelectric point | 10.2183227539 |
Runs | 9 |
Runs residual | 0.00527605049934 |
Runs probability | 0.0400400400401 |
Amino acid sequence | MKTLIQLQLQRTPVGLGTGNPSSFEDVHLLQNKNKHTGTKHEIGLLKTSQKLNVKKMTQG P |
Secondary structure | LLEHHHHHHLLLLLLLLLLLLLLHHHHEELLLLLLLLLLLEEEEEEEELLLLLLLLLLLL L |
PRMN | - |
PiMo | - |