NONHSAT146529

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT146529

Source

NONCODE4.0

Same with

,

Classification

sense

Length

493 nt

Genomic location

chr17-:19708040..19714550

Exon number

3

Exons

19708040..19708143,19713691..19713751,19714223..19714550

Genome context

Sequence
000001 TGTTTTCTCA ATTCTCCTAT AGACAAATAT TCATTGTCTT TAAATAAAAA TGGACTTCcc ctttgccctg ctactctttt 000080
000081 ttcccttacc ctgatttatt ttcctttata atgcttattg ctacctgaca ttattatGtt ttttttttga gaatgggatc 000160
000161 ttgctatgtt gcccaggcag gtctcaaact cctgggctca agctattctc ccgcctctgc ctccctaaat gatgggattc 000240
000241 caggcatgag ctaccacacc tggccTTCCA TGACATCTTG TTCAACAACT CATGCAAGAC CTGAGAGAGT GTTATGCAGG 000320
000321 AGGATGGGGT GATATGCCAG TGGGGACTGC TGGCAGACGT GCTTCAAATG AATTCTTGGT GTGTGGAGGG CAGTGTCAGC 000400
000401 CTACTGTGTC ACCTCACAGC GAAACAGCAC CAATTCCAGT TCCTACTCAA ATAAGGAATT ATCAGCGCAT AGAGCAGAAT 000480
000481 CTTACATCTA CTG
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Predicted Small Protein

Name NONHSAT146529_smProtein_152:331
Length 60
Molecular weight 6280.1387
Aromaticity 0.0677966101695
Instability index 54.4610169492
Isoelectric point 9.05633544922
Runs 8
Runs residual 0.00886331830197
Runs probability 0.0144740328564
Amino acid sequence MGSCYVAQAGLKLLGSSYSPASASLNDGIPGMSYHTWPSMTSCSTTHARPERVLCRRMG
Secondary structure LLHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLEELLLLLLLLLLLLLLHHHHEEEELL
PRMN -
PiMo -