NONHSAT096485
Revision as of 00:58, 17 October 2014 by 124.16.129.48 (talk)
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT096485 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
antisense |
Length |
1220 nt |
Genomic location |
chr4-:56814122..56815341 |
Exon number |
1 |
Exons |
56814122..56815341 |
Genome context |
|
Sequence |
000001 TCCCGCGGCC GCGCGGCCTC CCGGCAGTGC CCGAGCCCGG CCCGCGGGTA CCGCCCAGAA GGCGAAGGCG CCACCACCGC 000080
000081 CGCAGCTGGC CCTCTGGCTC CCACATCCGG ACTCACCGGC AGCTCCAGCC GCCGTTGCCT CCGCCTCCAG CCGCATTGCC 000160 000161 CTCAGGCCTC GAGTCCCCCA CTAGCTCCTT CCGTCCAGGC ACGGGCTCCG GCGCTAGAGC AGTTTGAAAA TGGCGCGGAG 000240 000241 GGACGATCGG GGCCGACACG GAGGAGGCGC CGCGGTTGCC CCGGTAACGG GAGCGGCGGA CGATTAGCGG CTCGCGGCGG 000320 000321 GGACGCGCTT GGCGACGATG GCGGAGCCCC AGTGCCCGGA AATGCAACGG CCCGGACAGC GCGAGGCCAC GGCGCCCCCT 000400 000401 GGAGGTCGGC GCCCGCGGCC AGCAAATGCC AAACCTCAGC TGGTGCCTGA GCTGGCATCC TCTTCCTCCT GTCGGCGGGA 000480 000481 GGTGTGGATC ACCTACTGCG TGCGGGGAAC AAACGCCGCC CCAGTACCGG TCCCTGCAGC GGAGTAGCCT TCACCTGCAA 000560 000561 GGTGAACGCC TGCTCACCAC GTAATCCCCA AACGCAGATA TCACGTTGTC TCTGCAACTT TCCCTGACAA CCACCCAATG 000640 000641 CAATTAATTA TCCCACAATA GTATCTCCCG CAGGCTCTCT GTAGAACCAT AGAATTCATC CATCAAAATA CAATCATTTG 000720 000721 TTGATCCGTC TCTCTCTGCC GCCCCCAAAT GTGAATTCCT TGAGTCAGAG ACTATTCTAC TCAGCAAAAC ATTTGTGAGT 000800 000801 GGAATTAAAT TGAAATAAAC CGTTATAGTC CACTCACAGA TGGAAAACAC ATAGTAAAAT CCTAGAATTC CATTTCTCCC 000880 000881 CTGAAAATTT CCCAGACAGT CAGAGGGAGT TTCATTCTTT CCTGTTTACT TTTCTCCCAA ATAGGCCTTC TGAGGCAGCA 000960 000961 GAATAGGGAA GGAAGTCAGA AGACTGACCA GCTCATACCT ATGGAATGCC TATCATACAT ACACTTAAAA TTATGGCAAG 001040 001041 CTCACGCAGG CGCACTAAGA GAGAAAAAAC AAGAAAACAG ATATGACAAT TATAGGAAAT CCCCTCCCTA GAGTTAAAGA 001120 001121 AGTGTAGGAA GTGGGTATAA AAGAACAAAG GCTATATTAA TCCAGGGCTG ACACCACTTG AAGATAAGCC CGTTCCTCTC 001200 001201 TCTGGTATAT TCTTTGCTTA |
Predicted Small Protein
Name | NONHSAT096485_smProtein_425:583 |
Length | 53 |
Molecular weight | 5745.5138 |
Aromaticity | 0.0576923076923 |
Instability index | 91.3653846154 |
Isoelectric point | 8.68353271484 |
Runs | 10 |
Runs residual | 0.041938287701 |
Runs probability | 0.0167903197315 |
Amino acid sequence | MPNLSWCLSWHPLPPVGGRCGSPTACGEQTPPQYRSLQRSSLHLQGERLLTT |
Secondary structure | LLLLLEEELLLLLLLLLLLLLLLLLLLLLLLHHHEEEELLEELLLLEEEELL |
PRMN | - |
PiMo | - |