NONHSAT096485

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT096485

Source

NONCODE4.0

Same with

,

Classification

antisense

Length

1220 nt

Genomic location

chr4-:56814122..56815341

Exon number

1

Exons

56814122..56815341

Genome context

Sequence
000001 TCCCGCGGCC GCGCGGCCTC CCGGCAGTGC CCGAGCCCGG CCCGCGGGTA CCGCCCAGAA GGCGAAGGCG CCACCACCGC 000080
000081 CGCAGCTGGC CCTCTGGCTC CCACATCCGG ACTCACCGGC AGCTCCAGCC GCCGTTGCCT CCGCCTCCAG CCGCATTGCC 000160
000161 CTCAGGCCTC GAGTCCCCCA CTAGCTCCTT CCGTCCAGGC ACGGGCTCCG GCGCTAGAGC AGTTTGAAAA TGGCGCGGAG 000240
000241 GGACGATCGG GGCCGACACG GAGGAGGCGC CGCGGTTGCC CCGGTAACGG GAGCGGCGGA CGATTAGCGG CTCGCGGCGG 000320
000321 GGACGCGCTT GGCGACGATG GCGGAGCCCC AGTGCCCGGA AATGCAACGG CCCGGACAGC GCGAGGCCAC GGCGCCCCCT 000400
000401 GGAGGTCGGC GCCCGCGGCC AGCAAATGCC AAACCTCAGC TGGTGCCTGA GCTGGCATCC TCTTCCTCCT GTCGGCGGGA 000480
000481 GGTGTGGATC ACCTACTGCG TGCGGGGAAC AAACGCCGCC CCAGTACCGG TCCCTGCAGC GGAGTAGCCT TCACCTGCAA 000560
000561 GGTGAACGCC TGCTCACCAC GTAATCCCCA AACGCAGATA TCACGTTGTC TCTGCAACTT TCCCTGACAA CCACCCAATG 000640
000641 CAATTAATTA TCCCACAATA GTATCTCCCG CAGGCTCTCT GTAGAACCAT AGAATTCATC CATCAAAATA CAATCATTTG 000720
000721 TTGATCCGTC TCTCTCTGCC GCCCCCAAAT GTGAATTCCT TGAGTCAGAG ACTATTCTAC TCAGCAAAAC ATTTGTGAGT 000800
000801 GGAATTAAAT TGAAATAAAC CGTTATAGTC CACTCACAGA TGGAAAACAC ATAGTAAAAT CCTAGAATTC CATTTCTCCC 000880
000881 CTGAAAATTT CCCAGACAGT CAGAGGGAGT TTCATTCTTT CCTGTTTACT TTTCTCCCAA ATAGGCCTTC TGAGGCAGCA 000960
000961 GAATAGGGAA GGAAGTCAGA AGACTGACCA GCTCATACCT ATGGAATGCC TATCATACAT ACACTTAAAA TTATGGCAAG 001040
001041 CTCACGCAGG CGCACTAAGA GAGAAAAAAC AAGAAAACAG ATATGACAAT TATAGGAAAT CCCCTCCCTA GAGTTAAAGA 001120
001121 AGTGTAGGAA GTGGGTATAA AAGAACAAAG GCTATATTAA TCCAGGGCTG ACACCACTTG AAGATAAGCC CGTTCCTCTC 001200
001201 TCTGGTATAT TCTTTGCTTA
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Predicted Small Protein

Name NONHSAT096485_smProtein_425:583
Length 53
Molecular weight 5745.5138
Aromaticity 0.0576923076923
Instability index 91.3653846154
Isoelectric point 8.68353271484
Runs 10
Runs residual 0.041938287701
Runs probability 0.0167903197315
Amino acid sequence MPNLSWCLSWHPLPPVGGRCGSPTACGEQTPPQYRSLQRSSLHLQGERLLTT
Secondary structure LLLLLEEELLLLLLLLLLLLLLLLLLLLLLLHHHEEEELLEELLLLEEEELL
PRMN -
PiMo -