ENST00000505870.1
Revision as of 05:56, 13 October 2014 by 73.162.128.239 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000505870.1 |
Source |
Gencode19 |
Same with |
lnc-WRNIP1-2:23,NONHSAT106656 |
Classification |
intergenic |
Length |
8217 nt |
Genomic location |
chr6+:2391780..2413825 |
Exon number |
3 |
Exons |
2391780..2399012,2399100..2399271,2413014..2413825 |
Genome context |
|
Sequence |
000001 AGGATGGGTT AGGATTGCTG AGATGGGCTG GAGCCGGGGC AGGGGGCCTC CAGCTAAGAG AGGCCTCCTG AGCTTACCTC 000080
000081 ATTTGGTCTC AGGGCTATTC TCATTTTCCA GATGAGCAGT GATGTGAACA ATATTGGAAA GCATCAAAGA AATGGATGTA 000160 000161 AAGTGTCTGG CACAGAGTGA GTGCTCAGTG ACTGTGGGTG CCCTCTCGTC CAGCTCCTCT CTGCTCTGAA CATGCCTTTC 000240 000241 TCACGGCACT TATGAGAATG TGCCATCGCT GTTTACTCCC TGTTTGTCCC CCTCTACATG CTAAATTCTT TAGGCCCAGG 000320 000321 GACTGTGTTA CACTCATCTC CATAGCCCCA GGCCTAGCAA AGTGCCTCCT GCCTAGTAGG TCCTCAGTAT TTGCTGAATG 000400 000401 AATGGATGAT GATTTCATGG AAGAATCACT CCCTAAAGTT TCCAGCAACA GGCTGAGGAA ACTCAGGATG AAAACATCAT 000480 000481 GTCTCTTGCC CAGTCTTCAC CATGCTTTTT AGTGGTGGTC ACTGCACTGC ATGTTTTCTT TAAGAAGGGT GAGCTCATGC 000560 000561 CAAGGACGAG GGCATGGGGT CTGTGCCGGG CACTTCCCAG TTCCACGTTC TGGGTGTAGG GAAGAGGGAG GATGCCCACA 000640 000641 GAGAGGGAGG GAACCAAATG CAGGAAAGGA GGGCAGGAGG GGCAGTGTTG GCTCCTGGCG GGCCTGGCAT ATGGCTGTGC 000720 000721 TCCGAGTTAC TTCTGGTCCT GTGTGTGGGG CTGAAGCTTC AGCTGCCACC AGACATCCCT GCCATGTCCC TCTTGAGAGT 000800 000801 CCTAACCTCA CTCTCAAGAC TCACCCCGAT GCTCTCCATG AAAATAAAAC GCACCTTCCA TGAAGTGTCC CCAGAAAGCT 000880 000881 CCACGGGGGA GGAAGTGCCA CTTAGAAATG AGAACCAATC CCAGGTGAAA GTCATGAGCT GAAAGGCCCA TATCAGGCTG 000960 000961 TCGTGGATGA CCTTGGATGC CCCTGAGGTG TCCTTAAAGG AGGCAGCATT CGCTTTCTCC CAGTGTGTGT GTGGCAGACC 001040 001041 ACATGCAAGC TTTTGGGCTG ACCCAGTTGT GACTATCACT GTGTCCTCGG GTTTCATCTT GGGGAAGGGA GTTGTACCAG 001120 001121 TTCTTACTCC TGGAGGCTGA TTTCCTAAAG TGCAAAATTG GGCCAGTCTG TTGAGGCCCA AGTGTTCTGG AAAAGATCTC 001200 001201 TGACAGATAC ATGGAAACTG AATTTAGTTG CTGGTTAAGA GCTTTCATGG GAGCAAAGCT CTTGGCTGTG GGTTTCTTGA 001280 001281 TTGTCAGGTA TACATTAGGG CAGTGGTCCC TAAACTTTTT GACCGTGGAG ACTGGTTTTG TGGAAGACAG TTTTTCATAG 001360 001361 ATTGGTTTCA GGATTAAACT GTTCCACCTC AGATCATCAG GCATTAGATT CTCATAAGGA GCGTGCAACC CGGATCCCTC 001440 001441 CCATGCACAG TTCACAATAG GGTTCCAGCT CCGATGAGAA TCTAATGCCA CCGCTGATCT GACAGGAGTT CAGGTGGTAA 001520 001521 TGTTTGTCCA CTGCTCACCT CCTGCTCTGT GGCCTGGTTC CTAACAGGCA ATGGACTGGT ACCGGTCTTC GGCCCAGGGG 001600 001601 TTGGGGACCC CTGCATCAGG GGACAGAACA ACATTTTGCA GAAGGGAAAA ACTGGTCTTC CTCCTTCTCC TTTTTTCTGT 001680 001681 ACTCGGCCTT CTCTCACTTG TGGACACTTC GTGGACATAG AAGAGGGGTG CAACACTGCA TCTGGTTCCT CCAAGTGTGG 001760 001761 TCTAAGACCC GCAACCTCTG CATCTCCTGG GAGCTTGTCA GAAAGGCTGA GGCTCAGGCC TCAGCCCAGA CCCACAGGAT 001840 001841 CAGAATCTGT ATCTTGACAA GACTCCCCTG GTGACCTGAA TGCACGTTCA AGTTTGAGAA CATTGATCTA ATCATGGAGA 001920 001921 TAGGTGTTTT GTGACCCAAC AGCCCTCATT TGGATTCTAG ACCCAAATCC GTAACACACT AACTGTGTAA CTGGGGCAGG 002000 002001 TTACTCTGAG GCTGTTCGAG TCTCCGAATC CTCATTTGTA GAATGGCACA GAAGTGCCCA CTCTATTATA GAGTTGTTAA 002080 002081 TGGGATTAAA TTAGTGAATG TAAAGCTCTT GGCACCCAGT GCTGGGAAGG GCAGCTATGG AGATGATAAT CATTCCCCTT 002160 002161 TGCCCCCCTT CCCAATCCTG GCACCCAGGA CCAAGGCCAG TGCTCTCAGC AGGAGGGAAG CAAGAGCACT GGCTTGACCC 002240 002241 ATTGGTGCTC AGGACGGGTA GCACTAAACA GTCCTTCCAA TCAACTTCAC GTTTCAAGTG CCTCACCGAG GATGTTGATA 002320 002321 GCAATGGGTA CAGTTGAGTA ACAGTTTACT CGTATTATTT CATTAGATAT TTTTATTAGT GCCGTTATTT CCATGCTTTT 002400 002401 GAAGGAATTC ATGAGTTTTC AACTTGTAAA TGCAACACAG TTTAAAATAG CAGTCTTTAA AAGTTATGGT TGTAAGTTTT 002480 002481 AGGCCCTCTG AATTAATGTC CTGCCCTATG TGTCTGGGCA TGAGGCCACA GATGCCACAC AGACTGTACC TAGTGCTGAG 002560 002561 TGGAGCCTAT GTGGAAGGGC TGCAGGGTTC AGCTAGAAGT ATCCACTGGG GCAAAGCTAG TGTTGGAAAG ATCCTGGTCT 002640 002641 GGCAGCAGAA TGGGCATCAA CGTTGTAAGA CTGCATGTAG CAGGGGGTGG CTGGATCACC TGGAGCCCAG GGACAAGCCT 002720 002721 TGGCACATCT ATCCCTTCTG ATTGATTTTA CATATTGAAG TCTGCTCTCA TGGGTCTCCT TGCCTTGAAG ATAATTTTCT 002800 002801 CTCTTTTCTG CTAAGGTCCT GAACGTTTCT GGCACATTAC TTGGACCTGA TGGTAAACCC ATTGCTTTGT CACAAGGCAC 002880 002881 TGGGAGGTTA TCAGCACTGA GATGCTTTCC AATGTGCAGT CTCAACCCAG TGCCCTCGGC ACACCCACTT CACTTAGACA 002960 002961 GTGGGACCTC AATAAAAATG TGTCTGAAAG GACACTGTGC CATCATTATC GGTTTAACGG CCAGGGCCAA TGGGGAGAAG 003040 003041 GGAGCAATAG TTGAGAAGTG TAAATGTGAG GGATATCTCA CAAAGCACGT AGGAAGCCAA GAAATGTAGG TGAAATGGAC 003120 003121 AGGAAAGATT TCTTTTTTCC ATAAGCCTCT TCATGTTTAT CTTGGAAGTG AAGAATTCTG AGACTACTCC ATGAATTGTC 003200 003201 ATTGTGGTAG CTACTCAGTT ATTCTTAGAT AAAACCAGCG GTCCCAAATC TCAGATAACT GTCAGGAATA ATGTTAGAAA 003280 003281 AGTCAAGATG AAATCTTTCT GTGCTTTTGA GCATCACACT TGGTTTTGAT GCAGGTGGCC AAACCACACT GTCCTGCAGG 003360 003361 ATGGCCACTC TGTCAGTTGG TGACTTCTTG CTCCAGGGAG CCCTGGGAGC TGATAACTCT TGGTTGGGGA ATGTTCCTCT 003440 003441 AGCTTTTTAC CAATTCAGTC TTTCACTGAC TGGTTATTCT TGCTTTTGTG GGCGGCCATA CAAATCATGT GCTGTGGGGA 003520 003521 AGTCATGTCA ATCATTTCAC TGTCTACAGG ATTCCCTGGA AGCTTGAAGC AATTTTTCAG ATAATTAAGT CCACAGAATA 003600 003601 CTTTTTTTTC CTCAATGATT GGGATATCTC AAGTGAGTCA AAACTTTATT GCGATTGCCT CAATTCTCCA TTTTCCTGGT 003680 003681 CATATATCAA AAAAGACTTT CTGCTTCCTA TATGTGGGGC TTAGCATCCA CATTGTAATT CACCAGAGAC TCTCTGGAGA 003760 003761 GCTTGGCTTG GTCCCATGTA TCCTAGTACA AGCTTGCCAC TGGTCTAAGT TAGAAAATAT ACAGATTTGG GGCCCACAGA 003840 003841 AATGTCCAAT TTTATACTTT TTTTTTTTAA ATGGAGAGGA GTCTCTGAGT GAGAGAGGAT TTGGAAAAAT GGCCAGCAGA 003920 003921 TAACAATAAC AATAGTGACT AACATTTATT GAGTACATAC CATGTGTTAA CTGTGTGAAA TAATTTTCAT GTAAACCTTT 004000 004001 TGGCAACCTA AGGTTGGCAG CATGGAAGCT TTGAGAGTGT AAGTTTCTTG TCCAGAATTT TATAACTAGA AAGTGACAGA 004080 004081 GCCTGGATTC CAACCTATAC CCATGGACAC CAGAGTGTCT ATATGTGTCT TTCCAGTGAG CGATGGTTCA CACTCATTGG 004160 004161 AAACATGAGT GCCATTGGAA CATACTAGTC AATATGATGC CGAAAACAGT AACAGAAAGA GTGCAGGTGT TGAATACGTG 004240 004241 TTCCTTTTCA CACTGGAAAG AAAGATGGTG AGAAGTTGGC ATGTCTTCCA CGCAATTCCA TCCCATCAGC TGGTCTCCAA 004320 004321 ATTCCCACTC CTCTTGGTTC CCACTTCTCT TTGTCTCTTT CCAGAAGGAA ACAAACTCCC TGATGACCCT CACTGAAAAT 004400 004401 TCACAAACTT TACAAATTTC AATAGATTAG CTGTGGCTTC TTTTTAAAAT ACTCATAGGT AGCTGGGTCC TGGAGAGCTC 004480 004481 TAAAGCCCTC TAATTTTGCT TGCAGACGGA AGAAGGGAAA CTCGAGTCAC TGGAGACAAA GGGGCAAAGG CATGGGTTTG 004560 004561 GCGGCAGAGG GAAAGAAATG GTCTGTGACC AGGGCTTAAG CTGCCTGTGT TGGCTCTGAG TGACAGTATG CTCTTGCTCC 004640 004641 AAGGACCTTA ATTGGCTGAT AGAGTGATTG CTTTGGCCAA AGGTCCAATT AATACTCAAG ATTTGAGGAC TGGTTTTCCA 004720 004721 ACCCCAGTTG GATGACTTTC CTGGCAAGCA AAGGTTACCG CTGTAAATTC AACTTGCTTC CTTAACTGGG CACCCACTCT 004800 004801 ATAATGTGAG GCTATCATTC TGTCTGGTTA ATTCCAGACA AGACTTTGTG AGCAGATGGG GAATTTGGAT TTTCAAATTC 004880 004881 GAAAAAAAAA AAAAAAAGCA TAAGTGAGTG TGAGTTTTAT GTAGTTACCT CGATGCTCCA CCTTGTGGAA AATGTGCTAA 004960 004961 ATCCCAATGT AGGAGGAGGC AGGATTGCAA ATGTGAAGCA GAGTGGTTGG CCCAGGGGTT TATGCTCACT GAGAATGTTC 005040 005041 TCATCAATAG CTTGCTGTGA TTGGCTATGG ACCTATTGAA ATCACCATTA AACTAGAAAA CAAAGTTACT CAGCCCTCGT 005120 005121 GTGGAAAGTG TCTAAGACAG TAATGCAGAG GCCGTAGTCT GAAGGTGGCA CCTCGCACTA CAGAACAATG GTAGGAGCTC 005200 005201 CAGGTTCGGA TCATGGTTCT GAATTTACTA GTTGTGTGCA CTTAAGTTGC TTAGTCTAAT TAATAAAGCA GGGATGATAA 005280 005281 TTCCTCTTTA CAGCTTTGTT GCAAGGATTG CATTAAAGAA AACATGTAAA AGCATAAGGG CATTCAATTA ATGTTACAAG 005360 005361 AGCCCTTCCC TCAACCCCAA GGGCGGCTGC AGCTGTTCAG CCTGACACTT TATGTGTGTT GGTCACAGTG CTGTCTTGGA 005440 005441 GAATCACATA CGGGATAGTG CTTACCTCCC CATAGCAGCC ACGTCATAGC AAATAGCTCA TTAGCATGCA GTTTCTTCCC 005520 005521 TCCCTGTTCA GCAGCCCAGC AGACAAGCTG TCTCAGAGCC TGGATTTCAG CATGTTGCAC TCACCGCAAA TATCCTGCAG 005600 005601 GCTGCCCACT CCATTCTGCT GCCCTTCGCA AGGCTTCACT TTGCCCTCCA ACCCTTTTTT TCTCTTGTTT ACCAGATGGA 005680 005681 ACGAAGTCTG TTTGTGGAAA CACCCTTCCC CTCTGTTTAC TTGGACCTGA TTTTGAAAGT AACAAGTCAC TTTATTTGGG 005760 005761 CTGGAGGAAA AAGCACTAAA CCAGATGTTG AGGTGACCGG GATTCCTGGA AGACATTCTT CTCTCCAACG AGACACATGA 005840 005841 TGCATGAAGT AGGAGCCCCT GGCAAGGAGC CCAGGCTGCC ATGGCCTCGC TCGCTCCTGC TTCCCGGCAT GGCCCCGAGG 005920 005921 CTAGCTGCCT CTGTACTGCC TGAGCATCGT CCCCTGGCGT GTCACCAGAC TACCCACTAC CTGTGCTTGC ACCTGCAGGT 006000 006001 GGGCAGTTCA GTCGTTGCAG GCTGAAGCTC CCTGTCACAG GAGTCCATCA GCACTGGAGT TTACCAAATG GCCCAGTCCA 006080 006081 GGTCTGTGTC ATATTGTTTT GCAAAAGCAA GAAAACTCAT TCAGAGCTTG TTACTTTTAT CCCTGACTTC CTAAGTGAGC 006160 006161 AGTGTAGCCA GAGAACTACA TCCCCTGACA TCCTTTAAGA GCCATGACCA CTCCTGCCCT TGCTTTGTGA CAGGCACTCC 006240 006241 TGGATGCTGA AGTGCTGTTG CTGTGCACCA CTATGCATCC TGTGTGAGGA TGAGCACTCC AGTCCTTGCT CCCTCTTCCC 006320 006321 GTGGCTGGCT CATTAGCCAG AGCAAACTGT GGCCTTGAAG GAGCAGAAGG AGCATTTGAC TCTTCCCAGC TCTCAGTCTT 006400 006401 TGGAAAATTG AGCAAAGTGG AATGAAAGCC ATTTATTCAT TTAACTGGCA GTTATTTATT GAGCATCTAT TATGTGGCAG 006480 006481 GCACCGTGGT GACACTGAAA AGAGAAGGGT GAACAAGGAC AGTCCTGAGC TCAAGCAGGC TGCTGGCAGG TGGTAGTGGG 006560 006561 GGCAGACAAG CAAAGGGGCA CCCATGCCAT GGCCTGCAAT GCACCACCTC CAGGACAAGG TTTGGGACCC ATCCCTGGGT 006640 006641 CTTGGGGGAC ATTCTAAAAG GAAGCAGTGG CTCAGCATAG ACCTGAAGGA CAAGAAGGCA CCAGTCATGT GTGGAGTGGG 006720 006721 TTGGTGGAGA TGCGCAGAGT GCAAGGAGGT CTGGAGGTGA GACCTCCAGG CAGAATGGAG GGAGGTGTGT CCCATAGCAT 006800 006801 GTGGACTCTA AGGGGCTGGG AGATCTTAGG GGTCCCTGGA GGCTGACTGA AGGCTGGCCA GGGAGCCTGC CTGGTAAGGG 006880 006881 CCTCCAAGGT CAGGTTTGGG TGTAAGAGTA GCCATTTCTA GCACTGGTTG AGGTGCACTT CCCTGTCAGT GCCCCAAAAT 006960 006961 CCTTCAGCAG TGTCTGATAC GATGTTCTAG ACTGGCATTG TTTCCAGTGC AGGCCCTGTC TCATTCTTCA GGAAGCATGC 007040 007041 TCATGGCAAT ACCCGGAGTC TCCACTGCAA GACCAGAGTG ACGGAGGCAG CAGAGCTCCT CAGCAGGCCA GGAGTCTCCA 007120 007121 GAGGCACTGC CGAATGTCTA AGAAGCAACC TCATTGTATT CCCAAGACCT GGGAATCCAG GTCTCGCAGA TACGATGATA 007200 007201 CAATCTATAG CCAGGACATC TCTTCATGTG TAGTTTTCAA TGAATACTAG GATAAGCAAC TATCCCAGTC TTCCCAGGAT 007280 007281 TGAGGGGCTT CTCCAGATGC TGCACTTCTG GTGCTAAAAA TGAGAAACTG AAATGAATTA GTCACCCAAG GAATGCTGAC 007360 007361 CCTGTGCTAT ATGATCACAT TTACTCTTTA AAGCAATGCT TTGAGAACAA TTGAGCTGCA TAGTCCCTGC AATCTTATAA 007440 007441 AGGCATTTGG CCTGGAAGAT GCTCTGCAGC CATGTGCCAA GAATAACGGC TATAGGGACA ATGTTTCATT AACCCCAAAG 007520 007521 CAGCAACCTG AACCTCTTAC TGTACAATAT CTGCTCCGTT CAGAATTAGC TCGACTTGAG TCACAGGATG AAGCTTACCA 007600 007601 AAAGGAATTT CCACGTCCAA GGAAGGAACC AAGATCACTG AGAGGTTATA GTATGAAAAG TGAAGAGAAA AAACCTATTC 007680 007681 TAAACATTTT ATTAATTGTC AATAATTATT TTAAAATATT TAATATAGTC TCCTACCTGG TCCACTGGCA TCAAGCTGCC 007760 007761 AAATTTACAC GGTCACTTTG GGAAGCCAGC TGGCAGGCAA ACATGGAAAG TGCTGGCTCC TAGCGTAGTG AGAAGACCAC 007840 007841 AGATAGATGG TAATTTTCTT CTTTGTTTTA TTTTTCTTTT TCTTCTCTCC CTCTTTTTCT TCCCTCTTGC CTTTCCCTCC 007920 007921 CATTGCCCAC TTTCTTTTTT TGGCTGCCGA AGATTTATTG CCTTTCAGTA CTTATAGATG ATGTTTTCAT AAGTTCTAAT 008000 008001 GAGGTCCCAG CAGTTTTTAA CAATAACAGG ACATTACTGT TCCTAAGATA TATTATGTGT TTTCCCTCAT CTTTCTCCCT 008080 008081 TGAATGAAAT GCTTAGAAGT AGGCTAACCC CCAATTCCCT TCCCTTTACT ATGATAAATG GCTCCATTAC TTAATAGGGC 008160 008161 TAAATACTCT GCTGTGACTT TTATACTGCT GATTTGAATA AAATCTTACG AAAAGCT |