NONHSAT024766
Revision as of 20:47, 16 October 2014 by 124.16.129.48 (talk)
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT024766 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
660 nt |
Genomic location |
chr11-:121899080..121908771 |
Exon number |
3 |
Exons |
121899080..121899553,121904022..121904170,121908735..121908771 |
Genome context |
|
Sequence |
000001 gaatctgaag aatcaggcct tactaagtgc cctccagtgg atgctgtggg gcaccacctc cttgaggacc aaggcactcc 000080
000081 agctgccagg aatttggctg ctaacctcac acagctgagc cttccatgaa aattgctctc tgccaaagag aacttcctag 000160 000161 tccaaggtca tgtctactct ccagagATGT GACTGGAGTG ATTTGCACCC GGATGCCTAG ACTCGCCAtc tgctcaaaga 000240 000241 ctgctcagaa agccctccca tgcattcccc tgctgcatac cagcccactc tgcctgcagc tgctgtctgc aggacttcat 000320 000321 atctatgcca cactgtgtaa aagctgtgct tcaagaaatc acaaaaacat tttcctgcac ctactacACA GCCTGAGTGC 000400 000401 GGCATAAGTT GACCTTGCTT GCTAAGAAAT GGGGCAAGAA ATGCTTTTTT GTGTGTGTCA TGTCTGTTTG TTTTTCAATT 000480 000481 AAGAGAGGAA AGCATTAGGC AGATGGAATG TACATGTGAG GATGAGGAGA CAGAAAACAA GTAGCCCTTT CCATCAAGAT 000560 000561 AGAGGGTTTT CTGGGGTTGC TGGCTATTGA ATGTCACTCC TGATTTCTCT TTCCAAGGCA CTGTACCACC AGCCTACTGA 000640 000641 GATTGTGTGG GAGCTTTCAT |
Predicted Small Protein
Name | NONHSAT024766_smProtein_125:406 |
Length | 94 |
Molecular weight | 10163.1957 |
Aromaticity | 0.0215053763441 |
Instability index | 66.076344086 |
Isoelectric point | 9.57904052734 |
Runs | 16 |
Runs residual | 0.0411190760653 |
Runs probability | 0.0348823087793 |
Amino acid sequence | MKIALCQRELPSPRSCLLSRDVTGVICTRMPRLAICSKTAQKALPCIPLLHTSPLCLQLL SAGLHIYATLCKSCASRNHKNIFLHLLHSLSAA |
Secondary structure | LLEEHHHLLLLLLLLEELLLLLLEEEELLLLHHHHHHHHHHHHLLLLLLLLLLHHHHHHH HHLLHHHHHHHHHHHHHLHHHHHHHHHHHHLLL |
PRMN | LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHH HHHHHHHLLLLLLLLLLLLLLLLLLLLLLLLLL |
PiMo | iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTT TTTTTTToooooooooooooooooooooooooo |