NONHSAT141707

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT141707

Source

NONCODE4.0

Same with

,

Classification

sense

Length

739 nt

Genomic location

chr16-:30125523..30128188

Exon number

2

Exons

30125523..30126029,30127957..30128188

Genome context

Sequence
000001 GCTGGGGGCA GGGGAGCAGG GGGGCACGTA GGCATCCCCC ATGCCAGGCC TGAGCCTTGC TGTCTCTACC ACCCCAGCCA 000080
000081 GTGGCCGAGG AGCCCTTCAC CTTCGCCATG GAGCTGGATG ACCTACCTAA GGAGCGGCTG AAGGAGCTCA TCTTCCAGGA 000160
000161 GACAGCACGC TTCCAGCCCG GAGTGCTGGA GGCCCCCTAG CCCAGACAGA CATCTCTGCA CCCTGGGGCC TGGACCTGCC 000240
000241 TCCTGCCTGC CCCTCTCCCG CCAGACTGTT AGAAAATGGA CACTGTGCCC AGCCCGGACC TTGGCAGCCC AGGCCGGGGT 000320
000321 GGAGCATGGG CCTGGCCACC TCTCTCCTTT GCTGAGGCCT CCAGCTTCAG GCAGGCCAAG GCCTTCTCCT CCCCACCCGC 000400
000401 CCTCCCCACG GGGCCTCGGG ACCTCAGGTG GCCCCAGTTC AATCTCCCGC TGCTGCTGCT GCGCCCTTAC CTTCCCCAGC 000480
000481 GTCCCAGTCT CTGGCAGTTC TGGAATGGAA GGGTTCTGGC TGCCCCAACC TGCTGAAGGG CAGAGGTGGA GGGTGGGGGG 000560
000561 CGCTGAGTAG GGACTCAGGG CCATGCCTGC CCCCCTCATC TCATTCAAAC CCCACCCTAG TTTCCCTGAA GGAACATTCC 000640
000641 TTAGTCTCAA GGGCTAGCAT CCCTGAGGAG CCAGGCCGGG CCGAATCCCC TCCCTGTCAA AGCTGTCACT TCGCGTGCCC 000720
000721 TCGCTGCTTC TGTGTGTGG
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Predicted Small Protein

Name NONHSAT141707_smProtein_275:535
Length 87
Molecular weight 9513.8365
Aromaticity 0.127906976744
Instability index 68.3348837209
Isoelectric point 10.7129516602
Runs 9
Runs residual 0.0349704963554
Runs probability 0.0272036742625
Amino acid sequence MDTVPSPDLGSPGRGGAWAWPPLSFAEASSFRQAKAFSSPPALPTGPRDLRWPQFNLPLL
LLRPYLPQRPSLWQFWNGRVLAAPTC
Secondary structure LLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLLHH
HLLLLLLLLLLHHHHLLLEEELLLLL
PRMN -
PiMo -