NONHSAT141707
Revision as of 03:03, 17 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT141707 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
739 nt |
Genomic location |
chr16-:30125523..30128188 |
Exon number |
2 |
Exons |
30125523..30126029,30127957..30128188 |
Genome context |
|
Sequence |
000001 GCTGGGGGCA GGGGAGCAGG GGGGCACGTA GGCATCCCCC ATGCCAGGCC TGAGCCTTGC TGTCTCTACC ACCCCAGCCA 000080
000081 GTGGCCGAGG AGCCCTTCAC CTTCGCCATG GAGCTGGATG ACCTACCTAA GGAGCGGCTG AAGGAGCTCA TCTTCCAGGA 000160 000161 GACAGCACGC TTCCAGCCCG GAGTGCTGGA GGCCCCCTAG CCCAGACAGA CATCTCTGCA CCCTGGGGCC TGGACCTGCC 000240 000241 TCCTGCCTGC CCCTCTCCCG CCAGACTGTT AGAAAATGGA CACTGTGCCC AGCCCGGACC TTGGCAGCCC AGGCCGGGGT 000320 000321 GGAGCATGGG CCTGGCCACC TCTCTCCTTT GCTGAGGCCT CCAGCTTCAG GCAGGCCAAG GCCTTCTCCT CCCCACCCGC 000400 000401 CCTCCCCACG GGGCCTCGGG ACCTCAGGTG GCCCCAGTTC AATCTCCCGC TGCTGCTGCT GCGCCCTTAC CTTCCCCAGC 000480 000481 GTCCCAGTCT CTGGCAGTTC TGGAATGGAA GGGTTCTGGC TGCCCCAACC TGCTGAAGGG CAGAGGTGGA GGGTGGGGGG 000560 000561 CGCTGAGTAG GGACTCAGGG CCATGCCTGC CCCCCTCATC TCATTCAAAC CCCACCCTAG TTTCCCTGAA GGAACATTCC 000640 000641 TTAGTCTCAA GGGCTAGCAT CCCTGAGGAG CCAGGCCGGG CCGAATCCCC TCCCTGTCAA AGCTGTCACT TCGCGTGCCC 000720 000721 TCGCTGCTTC TGTGTGTGG |
Predicted Small Protein
Name | NONHSAT141707_smProtein_275:535 |
Length | 87 |
Molecular weight | 9513.8365 |
Aromaticity | 0.127906976744 |
Instability index | 68.3348837209 |
Isoelectric point | 10.7129516602 |
Runs | 9 |
Runs residual | 0.0349704963554 |
Runs probability | 0.0272036742625 |
Amino acid sequence | MDTVPSPDLGSPGRGGAWAWPPLSFAEASSFRQAKAFSSPPALPTGPRDLRWPQFNLPLL LLRPYLPQRPSLWQFWNGRVLAAPTC |
Secondary structure | LLLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLLHH HLLLLLLLLLLHHHHLLLEEELLLLL |
PRMN | - |
PiMo | - |