NONHSAT026897

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT026897

Source

NONCODE4.0

Same with

,

Classification

sense

Length

548 nt

Genomic location

chr12-:10870716..10874995

Exon number

4

Exons

10870716..10870720,10871679..10871742,10873390..10873531,10874659..10874995

Genome context

Sequence
000001 TTTCCTTTGG GGAAGAGGAG GGCGCTAGAA GGAGACGGGG AGGGAAAGAT AGAAAAGCTT CTTGCCAGGA AGGGTCAGGT 000080
000081 GTCTGTCCCT GACGCCCTTC CCACATGGGC ATGGGAAAGA CGCCATGCTC CTGTTGGCCA CATGCCAGCA AAGAGATGTT 000160
000161 GCAATCGTCT CCGGGAAACT TGGGTCTTAG TCCCACGTCT TCCTCCCCCT CTCTGTGCCC ACGGCTGCAA ACAGCCATTC 000240
000241 AGTGTCCACC AATGGCTACA CGCTTCCCTC TTCCCGGACT GTGGGAACGC ACGTGGTGTA GCAGCTGAAA AAACTTTGTC 000320
000321 GGAAGTGGGG GTATGACTGT ATATGAAGTG GGTTTATGGT TTAAAGCAAG ACGTGGGAAT GAATTTGATC ATAAGAAGTC 000400
000401 CTTGGAGAAG TATTTGCGGA ATTACGAAAC TTTTTTAAAC TACATTGGAG AGTAAAAATA ACCTTCAGCT TGGATTGAGC 000480
000481 CACCAAAGTC CTTGGCACTG TCAAATGGTT CAACGTCAGA AATGGATATG GATTTATAAA TCGAAATG
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Predicted Small Protein

Name NONHSAT026897_smProtein_104:307
Length 68
Molecular weight 7221.3493
Aromaticity 0.0597014925373
Instability index 79.0582089552
Isoelectric point 8.78753662109
Runs 9
Runs residual 0.00898648120653
Runs probability 0.0261732320556
Amino acid sequence MGMGKTPCSCWPHASKEMLQSSPGNLGLSPTSSSPSLCPRLQTAIQCPPMATRFPLPGLW
ERTWCSS
Secondary structure LLLLLLLLLLLLLLLHHHHHHLLLLLLLLLLLLLLLLLLLHHHLEELLLLLLLLLLLLLL
EEEEELL
PRMN -
PiMo -