NONHSAT077790
Revision as of 23:50, 16 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT077790 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
995 nt |
Genomic location |
chr2-:240108184..240158365 |
Exon number |
3 |
Exons |
240108184..240108856,240111529..240111773,240158289..240158365 |
Genome context |
|
Sequence |
000001 TCCAGATGGA CTTTCTGGCC GAGACCAGCC AGTGGAGCTG CTGAATCCTG CCCGCGTGAA CCACATGCCC AGCACGGTGG 000080
000081 ATGTGGCCAC GGCGCTGCCT CTGCAAGTGG CCCCCTCGGC AGTGCCCATG GACCTGCGCC TGGACCACCA GTTCTCACTG 000160 000161 CCTGTGGCAG AGCCGGCCCT GCGGGAGCAG CAGCTGCAGC AGGAGCTCCT GGCGCTCAAG CAGAAGCAGC AGATCCAGAG 000240 000241 GCAGATCCTC ATCGCTGAGT TCCAGAGGCA GCACGAGCAG CTCTCCCGGC AGCACGAGGC GCAGCTCCAC GAGCACATCA 000320 000321 AGGCCAACAC AGATGCTGGC TGAGGATGGC CTCAGGGGCT CCTGCTGAAT TCCATTTTTC CTGTTGTCAC TGCACCCTGG 000400 000401 TGAGCCCTGC AGTCCTTGCC GTTGATCCAC CTGGAGCATT CACAGTGCAT GATTAGGACC CCACCCCGAA GCCGCCATGG 000480 000481 CTGTCGGTGC AGAGCGAGGT TAAAGAGATG GGATTGCTGA TGTCTCATTC CGTGCTGGTT GAATTTGTAG CTTTTACAAG 000560 000561 AAGACGACGT AGATGAGAAG CTGAGAAGTA AGCCTAAGCC CCGTGTGTTT GACTGGGGCT CCTCAAGGTA GTCCTAGGAG 000640 000641 GCCAGAAGAC ATAAAGAAGA CACTTGAGTT GGGGTCAGTG CTGCCATCTC AGGGTGAGGC CAGGTCTCAC CTCCAGAACC 000720 000721 CCTCTGCCTC TCCTCTTCTG GTGCCCCAGG AGCTGGCTTC ACTGCTTGGA AGAGAGCACC CCGACCCCAG TCCTCACGTC 000800 000801 GCTCCTACAG GCCAGGCCTT CAGGCCATGC TCCTCATTCC TGGAGGGGTC CCTGGGAAAG CCCACCCCAT CACCCTCTGA 000880 000881 GAGATGGCCA GAGACCTTAG AACCATGGCT CTGGAGCCAG TCTCTGGGCC AGGGTCTCAA AAGCACAGAA AGAAGTTCAA 000960 000961 GGTTGCCTTT CTCTTTGCAT TTTAATCATT TATTT |
Predicted Small Protein
Name | NONHSAT077790_smProtein_80:367 |
Length | 96 |
Molecular weight | 10523.6269 |
Aromaticity | 0.0631578947368 |
Instability index | 114.961052632 |
Isoelectric point | 11.5676879883 |
Runs | 15 |
Runs residual | 0.0288437629507 |
Runs probability | 0.0494435612083 |
Amino acid sequence | MWPRRCLCKWPPRQCPWTCAWTTSSHCLWQSRPCGSSSCSRSSWRSSRSSRSRGRSSSLS SRGSTSSSPGSTRRSSTSTSRPTQMLAEDGLRGSC |
Secondary structure | LLLLEEELLLLLLLLLLLEEEEELLEEEEEELLLLLLLLLLLLEEELLLLLLLLLLEELL LLLLLLLLLLLLEELLLLLLLLHHHHHHLLLLLLL |
PRMN | - |
PiMo | - |