ENST00000582838.1

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

ENST00000582838.1

Source

Gencode19

Same with

lnc-GGCT-1:25,NONHSAT119893

Classification

intergenic

Length

585 nt

Genomic location

chr7-:30589934..30591836

Exon number

2

Exons

30589934..30590397,30591716..30591836

Genome context

Sequence
000001 ATCATTTCCC TGAGCTCACT TTATCCTTTT CCTTCTTAAA GGCGACCATT TCATTAAGTT TTTAAGTGCC TGGTAATTGC 000080
000081 TTGGTTATGA CCGGTGTCTG CTCCATGGCA GCCTCTTCCT GAAGAAATGC TGAGGCAGTG TCACGCTGGT GTCTGTCCTC 000160
000161 CTTACAGAAT GCCTGAACAG TTCCATTGAC TCAAAGTGAA GATCAAAAGA ACCAAATGAC AGCAATAGCC AAGTGTAATC 000240
000241 ATCAGTAACC CTGTGTTCTA TCCACAGGTA AAAAACAATC ATCCTCTTCA TTATGGGTTT CAATTTTAAA TGTAATACAT 000320
000321 TTTTAGAAAT GCCTATTTCC TTTTATAATC TCTTTATATA ATCTAGGTTA TTCTGGCTCT TAGGTCTTCA TTTAGCTACT 000400
000401 GAAAAGATTT GATCTCAAAT CAATGATCTA ACCACCCATG ACCATCTCCC ACCTCTCTCC CCGTACACCC CCCAGCATGA 000480
000481 ATTCTGGGAA CTCAGGTAAA ATGCTTTCTG GAAACCTGCC TGTATTAGTC TGTTGTCAAG CTGCTAATAA ACACATACCC 000560
000561 GAAACTGGGT AGTTTATAAA GGAAA
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Predicted Small Protein

Name ENST00000582838.1_smProtein_437:571
Length 45
Molecular weight 4577.2717
Aromaticity 0.0
Instability index 51.5409090909
Isoelectric point 8.88751220703
Runs 8
Runs residual 0.0187165775401
Runs probability 0.0434883412826
Amino acid sequence MTISHLSPRTPPSMNSGNSGKMLSGNLPVLVCCQAANKHIPETG
Secondary structure LEEEELLLLLLLLLLLLLLLEEELLLLLEEEEEHHHLLLLLLLL
PRMN -
PiMo -