ENST00000447911.2

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

ENST00000447911.2

Source

Gencode19

Same with

NONHSAT041082

Classification

intergenic

Length

812 nt

Genomic location

chr15+:25425461..25427855

Exon number

4

Exons

25425461..25425587,25426957..25427042,25427166..25427252,25427344..25427855

Genome context

Sequence
000001 GACCCCAGAG GAAGACGTGC ATTGGGTCCG CTGGCCCCAG GCCAGTGTCT CTCAGCCATG TGCTCAACAC CTGGTGAGCT 000080
000081 GAAGCTCAGG CCCTTCCTGG CATCCTGGTC TCCTGCACTG AGCTGTGGTC TGCAGCGGCA TCTGGCATCC AGGCCAGCCT 000160
000161 CCTTGGTGGG CCGTGAACTG AATGGTGGCG CTGGCCTGTG CCCAGTATAT CTGGGTTCGG TGGCTGAGAG AGCTTTTGTT 000240
000241 GCCCTGTGTC CGTGACGGGC CAGTGTTCTG CATGCATCCC ATCACATGGA TCCATGGAGG ATGTTGAGCC CAGAGGAAGA 000320
000321 CTTGCACTGG GCCCAATGGC CCCAGGTCAG CGTCCATCAG CCAGGTGTCC AGCCCCTGGT GCACTGAAGA TCGGGCCCTT 000400
000401 CCTGGTGCCC TGGTCTCCTG CATTGAGCTG TGGTGAGCAC ATCCGGATCC TGCTGGATGC GTGTGCGGGG AAGGGGGTGC 000480
000481 CCTGGGTTGG GTCAATGAGA ACCTTATATT GTCCTGAAGA GAGGTGATAA CTTAAAAATC ATGCTCAATA ATAGGATTAC 000560
000561 GCTGAGGCCC AGTCTAGGTG AGAGGTTTGG AAGAGGATGC TGGGATTCCG AGGTCCCCAG GAGGGCCCCT GTATTTTTGG 000640
000641 CTGGAGACCT GGAGGCCCTG AAGGGCATCT TGTGGGTGCC CAACCCTGTC TCTGCGCTCC TCCTTGAGGC AGCCCAGGCT 000720
000721 CCCTGTGCAG GCTTGGTGTC AGCCCTCCAG TTCCCTGGGT TTGAGGCACA TGGGAAGCTC CTTTCTGAGC CCCGTTCTCC 000800
000801 TCTTGTGTCT TT
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Predicted Small Protein

Name ENST00000447911.2_smProtein_293:526
Length 78
Molecular weight 8238.6223
Aromaticity 0.0519480519481
Instability index 59.8701298701
Isoelectric point 8.48931884766
Runs 11
Runs residual 0.00677583286279
Runs probability 0.0451735157619
Amino acid sequence MEDVEPRGRLALGPMAPGQRPSARCPAPGALKIGPFLVPWSPALSCGEHIRILLDACAGK
GVPWVGSMRTLYCPEER
Secondary structure LLLLLLLLEELLLLLLLLLLLLLLLLLLLLLLLLLEELLLLLLLLLLHHHHHHHHHHHLL
LLLEELLLLEEELLLLL
PRMN -
PiMo -