NONHSAT004695
Revision as of 19:33, 16 October 2014 by 124.16.129.48 (talk)
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT004695 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
718 nt |
Genomic location |
chr1+:96457997..96488335 |
Exon number |
5 |
Exons |
96457997..96458065,96461677..96461750,96471749..96471977,96486854..96486952,96488089..96488335 |
Genome context |
|
Sequence |
000001 gaagaaaggt gatcaggaag agccatcaaa gtgttatcct ggaattcaag tgaagacagt gtttcaaAGT GGAAATGAAC 000080
000081 AGTGTCCTGT AACCCTCAGA GTGAGACTAG AGTCAGAATG CAGGCTTTTC TCATTTGAAA TCTCAAGGTA AGTCCAGGTC 000160 000161 CTTACCTCCA CCTAAAAGTT CTGCCATCAA GGAACATCTG CTCATTATCT TCTGTTCACA CATCAAATGA CTTCAATGTG 000240 000241 ATCCCTGGAT GTTCTCCAAA GAGCTGAAGG GAAATAAATA TTCTTTCTTT ATCACCAAAT ACTTCAACTG CAGAGTGATT 000320 000321 GTGCTACCAA GGCCTGAAAC TTCGGAAAAA CCTGCATAAC ACAAAATATA AAGTAAGAAG GCCCATTCTT ATCAGCAACC 000400 000401 ATATATGTAC TTCTCATCAC TCTCTCAAGA CCCTCTACTG AATCAGAAGC AAACACTAGC TACAGAGAGA TATATGCCAC 000480 000481 AGAGAGGATC CAGAGAGCCC ATCTCCGGTC AGTTATCTGT ATTTGTATGT CAACTACAGC ATCAAAAAGC ATAGGCATGG 000560 000561 ATACTAAGGA CCCCCTCTGT ACACCAACGC CAGTCCAAAG GACAGTGTGT CACTGTGAAC TGGAAATTCA TCTCTCTTCT 000640 000641 TCAATTTTTT TCTACCTACT TTATGTTTTA TCTCTAAGTT GAGGCTGTTT ATGGCCTCAT CCTCAATTAC CTTGTCCC |
Predicted Small Protein
Name | NONHSAT004695_smProtein_404:553 |
Length | 50 |
Molecular weight | 5641.3776 |
Aromaticity | 0.0816326530612 |
Instability index | 65.206122449 |
Isoelectric point | 9.10028076172 |
Runs | 7 |
Runs residual | 0.019194704909 |
Runs probability | 0.034749034749 |
Amino acid sequence | MYFSSLSQDPLLNQKQTLATERYMPQRGSREPISGQLSVFVCQLQHQKA |
Secondary structure | LEEEELLLLLLLLHHHHHHHHHHLLLLLLLLLLLLEEEEEEEEEEEELL |
PRMN | - |
PiMo | - |