NONHSAT081210

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT081210

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1152 nt

Genomic location

chr21-:17066619..17068900

Exon number

2

Exons

17066619..17067073,17068204..17068900

Genome context

Sequence
000001 ATGTATGTAC TGTGGGCTGT GGGCTCAGTT AGGGCCTGGG TTCCAAAATT CAGCTTAATG CAGGAGACTA GACCCTTTGG 000080
000081 AGTTGGTTGT AGTTTTATAG CAAAAGAAGT GAGAGTGAAT AATGCATTTT AGGTAGTGGG ACAAAAATAA GTTGCTTGAG 000160
000161 GCAAAACCCG AATGATGATA CTGGCTTTAA AGAATATGAT CTTAATAAGG AAAGCTTTAT GATGGTTATG ATGGTATCCC 000240
000241 AAAGCAGTGG CAGCACCAGC CCCGTCTACA ACCCAGTGAT CGAATCCTGC CACTGCTGCT GCAGTTGTTT CAACTATAAC 000320
000321 AGCAGCTGTG GCTCAAGTCC CAGCCTCTGT CTTTGCTTTG CTTGCCACTT GTGCGGCTGT ACCCATCACT CCAGCATCAA 000400
000401 AGACAGTATC TTCTGCACCT GCACCTAGTA GTGCAACTAA ACAAGAGAAA CTTGCAGAAA AGTCAGTGAG AACATCAGTG 000480
000481 ATTAGTAGCC CAATATCAAC TGAGAACTCA TTAGAAGATT TTTCTCTGGA AAACATTTTG AAGATGCATC AAGAACATTA 000560
000561 ATGACAGATT GACCTTATAA AAATAGGGTA ATGAGATCAT GTAAACATGT TATGACCAGG AACAAATAAT TACAGCTCTC 000640
000641 AAAACTAGTT TCAACAACGC TGGCAGAGCA GTAAAGTATC TTTTCTTTTC TTTACCAAAT ATCTTTTAAT GGGAAGTCCT 000720
000721 GGAAAAATAG AAAGCAAGGC TATAGTTGAA CCTCCTTAAG TGGCTAGTAC TGGACTCCTC CATCTTCACC AGAGGCAACA 000800
000801 GCTGCAGCAA CTACAGCAGC ACCTTCTAGA GGATCTGCCC TTGAATTTTG ATGGAATCAG CCTCAGTTTC AATACAGGAT 000880
000881 ATACAACACT TAACAGAATC TGTCCCTGCT TCCAGTATTG CTACCTCAGA TAGGTCAAGA GACTCCTCAA TGATTGGTAC 000960
000961 AAATTAGCCA ACCTTGGGAA CATTTATTGA AATGCCAAAT GGACCAGTCC TAGAAGCTAG TGGAGGAGTG GTTGGAAGTG 001040
001041 GCAGTGGAGG AGCCGATGAG GCAAAAGTGT GCTTAACCAC ATTCAAGCAT TGCCCCAGGA AACAGACACC AGAGAAAGGT 001120
001121 CAACTGCATC AGGATTTCCT GAGGGACTCG TG
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Predicted Small Protein

Name NONHSAT081210_smProtein_218:427
Length 70
Molecular weight 7362.5148
Aromaticity 0.0724637681159
Instability index 106.62173913
Isoelectric point 6.35101318359
Runs 11
Runs residual 0.0200889654183
Runs probability 0.0284402049108
Amino acid sequence MMVMMVSQSSGSTSPVYNPVIESCHCCCSCFNYNSSCGSSPSLCLCFACHLCGCTHHSSI
KDSIFCTCT
Secondary structure LEEEEEELLLLLLLLLLLLEEEELLEELLLLLLLLLLLLLLLHHHHHHHHLLLLLLLLLL
LLLEEEELL
PRMN -
PiMo -