NONHSAT081832
Revision as of 10:55, 16 October 2014 by 192.168.72.52 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT081832 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
673 nt |
Genomic location |
chr21-:35284671..35288028 |
Exon number |
3 |
Exons |
35284671..35284703,35286754..35286804,35287440..35288028 |
Genome context |
|
Sequence |
000001 AGAGAAAGGT GGTCCTGAGA GCCAGTGGGA GGATCCCTCC TGGGATGACC GGTACCAAAC CTCGAGCACC AGGGTGCGAT 000080
000081 GCTTCGGCTG GGGAAGTCTG GCAGTCTTCA AGGTTATGGG ACCTGGCGAG TGGGAGCGAC TCAGGACGAC CCAGCGTTTG 000160 000161 TCCCCCGGGA TGCCTACGGG GCAGTAGGCG CGGGGCTGCG CGTGCCGTAA CCTTGGCGTC TTCCGAGCAC AGCCCCTGGA 000240 000241 AGCTGCTAGC CTGAGGGGCG CAGGAGAGGG GGTCTGCCCT TCGCTGAATT CCGGGGAAGG GGCATGGACT AGCCCCCAAA 000320 000321 TCAGCTTCCT TTGCCATTGT GGTAAAACCT GTCAGAGATC ACTTACTAGT AATGCTAAGG AATATTTGTA AAACAcattt 000400 000401 cacagtttta taaataaaat gaggccgaaa agtttaaatg agtctttggc tgctcagtca gtaagtggta gaattgagat 000480 000481 ttgaacccac ggaatcACCC AGAAGATCGA GTTTGAAAAA ATGTTATGCT GTTTGTGCTG CATCTCACCA TGGTGCTTTA 000560 000561 CATATCATGA CCCCTTCCTG GCATCTTAGG TGCGATGCTT CAGTACCTCT GTGGTCAGAC CATTTGCCAA GCTTGTGAGG 000640 000641 CCTCCTGTTC AGGTATACGG TATTGAAGGT CGC |
Predicted Small Protein
Name | NONHSAT081832_smProtein_44:253 |
Length | 70 |
Molecular weight | 7151.9762 |
Aromaticity | 0.0434782608696 |
Instability index | 59.584057971 |
Isoelectric point | 9.60369873047 |
Runs | 8 |
Runs residual | 0.0233892954513 |
Runs probability | 0.0269055820527 |
Amino acid sequence | MTGTKPRAPGCDASAGEVWQSSRLWDLASGSDSGRPSVCPPGCLRGSRRGAARAVTLASS EHSPWKLLA |
Secondary structure | LLLLLLLLLLLLLLLLHHHLLLHHHHHLLLLLLLLLLLLLLLLLLLLLLHHHHEEEELLL LLLLLLLLL |
PRMN | - |
PiMo | - |