NONHSAT147912
Revision as of 03:25, 17 October 2014 by 124.16.129.48 (talk)
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT147912 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
antisense,sense |
Length |
1199 nt |
Genomic location |
chr16-:3072626..3074270 |
Exon number |
3 |
Exons |
3072626..3072999,3073234..3073969,3074182..3074270 |
Genome context |
|
Sequence |
000001 CGTGCCTAGA GCGGTTCCTC TCCGTGGCGC CCTACCGCCT TCGGCGCGAA GGTGGCTGGT GCGTACCGTC CCGAACCCTA 000080
000081 GGAGCCGAGA TCCCACCCGC AGGACCCCAA AACCCAATGA TCCTGCAGCA GCCCTTGCAG CGAGGCCCCC AGGGAGGGGC 000160 000161 CCAGCGCCTC CCGCGGGCCG CCTTGGGGGT GACTTGGGGC CTGGACGCCA GGTGCGTGTA GGGGACCAGG GTGGGCCTGA 000240 000241 CCAAGGGCCG CAGGAGCTTT GGCTGGGTGC TCAGGACTGG TCTGCAGGAT GAATACGGGG TGGGGCGAAT CGGCGGGGCT 000320 000321 TAGGCGTGAG CTGAGATGGG ACTGGGGCTG CGGCTGAGGG TCGAGACTTC CGAGGTACCC TGCTGGATGG TCCAGGAGAG 000400 000401 CGGGGACCGG CACCAGCTGA GACAGGAATG GGCTTGGGGC TCCTGGCTGA TGCTGCAGGC TTAGGCGGGC AGATCCTTGG 000480 000481 GAAGGGGCCA AGAGGGTGGG GTGCACCAGG CTCTCTTTTT TTCCCAGCTC CCCTCTCCGA GGAGCTGTGC CCATGAGCAC 000560 000561 CAAGCGGCGC CTGGAGGAGG AGCAGTGAGT TTGGGGGCAG GGAGGGACTC CCAACAAGAT CTCTGTCACC TCTGGTCCCC 000640 000641 AACAGGCTGC CTCCTGTGTC AGTATCCCAG CCTGCCTCTC TGCCATCTCT CCCCAGGGAG CCTCTGCGCA AGCAGTTTCT 000720 000721 GTCTGAGGAG AACATGGCCA CCCACTTCTC TCAACTCAGC CTGCACAATG ACCACCCCTA CTGCAGCCCC CCCATGACCT 000800 000801 TCTCCCCAGC CCTGCCCCCA CTCAGGAGCC CTTGCTCTGA GCTGCTTCTC TGGCGCTATC CTGGCAGCCT CATCCCTGAG 000880 000881 GCCCTCCGTC TGCTGAGGCT GGGGGACACC CCCAGTCCCC CCTACCCTGC AACCCCAGCT GGGGACATAA TGGAGCTCTG 000960 000961 AGTGCTGGTG GACAGTGCCC CTCCCACCTT CCTTCTTCCC CACAACAGAA GAGACCAGCG ACTCCCGCAA AGGGACAAGG 001040 001041 TTCCTCCCTC TCCTGCAGAG TAGGCATCTG GGCACCAAGA CCTTCCCTCA ACAGAGGACA CTGAGCCCAA CGGAGTTCTG 001120 001121 GGATGGGAGG GGTGGGAGCA TGGGAAGGGA GGCATCCCAC CCCCAAGAAG AACTGAATAA AGATTGCTGA GCAAAGGAA |
Predicted Small Protein
Name | NONHSAT147912_smProtein_335:463 |
Length | 43 |
Molecular weight | 4971.6787 |
Aromaticity | 0.0952380952381 |
Instability index | 64.3785714286 |
Isoelectric point | 5.57366943359 |
Runs | 7 |
Runs residual | 0.00949367088608 |
Runs probability | 0.0250334367981 |
Amino acid sequence | MGLGLRLRVETSEVPCWMVQESGDRHQLRQEWAWGSWLMLQA |
Secondary structure | LLLLEEEEEELLLLLLHHHHLLLLHHHHHHHHHHHHHHHHLL |
PRMN | - |
PiMo | - |