NONHSAT125736
Revision as of 06:55, 17 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT125736 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
495 nt |
Genomic location |
chr8-:28314175..28331303 |
Exon number |
3 |
Exons |
28314175..28314447,28321129..28321335,28331289..28331303 |
Genome context |
|
Sequence |
000001 CTGCTTGGCA AATGGTTTGA CAAATGGACA GACTCTCAAA GAAGAAGAAT CCTCACAGGC CTGTTGGAGC GCTGCTCGCT 000080
000081 GTCCCAGCAA AAGTTCTGCT GTCGAAAGCT TCAAGAGAAA ATTCCAGCAG AAGCCCTGGA CTTTACAACC AAGCTTCCAA 000160 000161 GGGTGTTATC TTTATACATC TTTTCTTTCC TGGACCCTCG GAGCCTTTGT CGTTGTGCAC AGGTGTGCTG GCATTGGAAG 000240 000241 AACCTTGCTG AGCTGGACCA GCTCTGGATG CTGAAATGTT TACGGTTTAA CTGGTACATC AATTTCTCTC CAACTCCCTT 000320 000321 TGAGCAGGGG ATCTGGAAGA AGCACTATAT TCAAATGGTG AAAGAACTTC ATATTACCAA GCCTAAGGTG AATTTTAGAC 000400 000401 AGAAAGCCAC AAGCTTGCAA ACATTGGCTC TTTGCAAATT CTAGAACTAA GAATAAAGGA TCAGACTGGA AGTTGGGGAA 000480 000481 GGGAGGTAGT TCAAA |
Predicted Small Protein
Name | NONHSAT125736_smProtein_23:250 |
Length | 76 |
Molecular weight | 8070.3762 |
Aromaticity | 0.0533333333333 |
Instability index | 53.6786666667 |
Isoelectric point | 9.69488525391 |
Runs | 9 |
Runs residual | 0.0289361702128 |
Runs probability | 0.0428271408664 |
Amino acid sequence | MDRLSKKKNPHRPVGALLAVPAKVLLSKASRENSSRSPGLYNQASKGVIFIHLFFPGPSE PLSLCTGVLALEEPC |
Secondary structure | LLLLLLLLLLLLLLLHHHHLLHHHHHLLLLLLLLLLLLLLLLLLLLLEEEEEEELLLLLL LLLLLLLLEEELLLL |
PRMN | - |
PiMo | - |