NONHSAT084437

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT084437

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

818 nt

Genomic location

chr22-:25959109..25960685

Exon number

2

Exons

25959109..25959448,25960057..25960685

Genome context

Sequence
000001 GTCGCCCTCC CCTCGGGGTG GCCACGAGGG ACTCCTCCTC CTCTTCCTCC TCCCCTCCCT CCCCCTCGGT CTCCGCCTCC 000080
000081 TCCTTCTCCT CCTCCTTCAC TGCCCCGACC TCCCGCCCCA GGTTCCACGC GCTCTGATGC CCGCCCCGCT CACCCAGAGA 000160
000161 AGCCCTGGGC CAGACGTCCA CAACCCAAGG GGTTATGGGG AGGCCTCTGC TCCCTGGACA CAGTAGTTCT CAAACTGGAC 000240
000241 AGTGTCAATC AGCATCCTCC GGGAGGTCTG GGGTGGCCCC GGAAATACAT GTGTCCCACC TATCCCAGCA GGTAATGATG 000320
000321 AAACTCCTGC TCTGGTCCGG GCTACCGGTG AACAGCGCCC AGCGGGCCGG GCCCCCAACC TCGCTCCTGA GCCTGAACAT 000400
000401 CCCCCCAACC CCACCGTGAG AATTCAGCGA AGAGTAAAAG CTGGAAAAAG TTGCGTGTCT TAGGCTAAGC AGAACAAAGT 000480
000481 GGGGTGACGG CTCCCCGGCT AGGAACAGAG ATGCCCTTAG GGAGCCCTCT GATGGAAGAG CTCTCCGCTT AAGAAGGTCA 000560
000561 CCACTCCCTT ACACTCAGCC CCCCTCAATC TGATTCCCTG CTATGCCTGC CATCACCACT GGCCAGTTTT ACCACATGCT 000640
000641 TCTCAAGACC CAAGGCACAA TAGGCATAAA GTTGTCCTGA AAAGGACAAG AGGAGTGTCA GAAGTAGGAA TGGCAGTTGA 000720
000721 AGGAGCTTCG TCTGCCAGCA GAAAGCTGAA ATGACAGGCA AGCACAAAAT ATATTAAGGA GACAAAGCTA TGCATGAGCG 000800
000801 AAATATCAAA CTTTCATC
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Predicted Small Protein

Name NONHSAT084437_smProtein_194:418
Length 75
Molecular weight 7679.7523
Aromaticity 0.0135135135135
Instability index 67.8054054054
Isoelectric point 10.7631225586
Runs 9
Runs residual 0.0210283454186
Runs probability 0.0353687020354
Amino acid sequence MGRPLLPGHSSSQTGQCQSASSGRSGVAPEIHVSHLSQQVMMKLLLWSGLPVNSAQRAGP
PTSLLSLNIPPTPP
Secondary structure LLLLLLLLLLLLLLLLEEELLLLLLLLLLEEEEELHHHHHHHHHHHHLLLLLLLLLLLLL
LLLEEELLLLLLLL
PRMN -
PiMo -