NONHSAT084437
Revision as of 00:17, 17 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT084437 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
818 nt |
Genomic location |
chr22-:25959109..25960685 |
Exon number |
2 |
Exons |
25959109..25959448,25960057..25960685 |
Genome context |
|
Sequence |
000001 GTCGCCCTCC CCTCGGGGTG GCCACGAGGG ACTCCTCCTC CTCTTCCTCC TCCCCTCCCT CCCCCTCGGT CTCCGCCTCC 000080
000081 TCCTTCTCCT CCTCCTTCAC TGCCCCGACC TCCCGCCCCA GGTTCCACGC GCTCTGATGC CCGCCCCGCT CACCCAGAGA 000160 000161 AGCCCTGGGC CAGACGTCCA CAACCCAAGG GGTTATGGGG AGGCCTCTGC TCCCTGGACA CAGTAGTTCT CAAACTGGAC 000240 000241 AGTGTCAATC AGCATCCTCC GGGAGGTCTG GGGTGGCCCC GGAAATACAT GTGTCCCACC TATCCCAGCA GGTAATGATG 000320 000321 AAACTCCTGC TCTGGTCCGG GCTACCGGTG AACAGCGCCC AGCGGGCCGG GCCCCCAACC TCGCTCCTGA GCCTGAACAT 000400 000401 CCCCCCAACC CCACCGTGAG AATTCAGCGA AGAGTAAAAG CTGGAAAAAG TTGCGTGTCT TAGGCTAAGC AGAACAAAGT 000480 000481 GGGGTGACGG CTCCCCGGCT AGGAACAGAG ATGCCCTTAG GGAGCCCTCT GATGGAAGAG CTCTCCGCTT AAGAAGGTCA 000560 000561 CCACTCCCTT ACACTCAGCC CCCCTCAATC TGATTCCCTG CTATGCCTGC CATCACCACT GGCCAGTTTT ACCACATGCT 000640 000641 TCTCAAGACC CAAGGCACAA TAGGCATAAA GTTGTCCTGA AAAGGACAAG AGGAGTGTCA GAAGTAGGAA TGGCAGTTGA 000720 000721 AGGAGCTTCG TCTGCCAGCA GAAAGCTGAA ATGACAGGCA AGCACAAAAT ATATTAAGGA GACAAAGCTA TGCATGAGCG 000800 000801 AAATATCAAA CTTTCATC |
Predicted Small Protein
Name | NONHSAT084437_smProtein_194:418 |
Length | 75 |
Molecular weight | 7679.7523 |
Aromaticity | 0.0135135135135 |
Instability index | 67.8054054054 |
Isoelectric point | 10.7631225586 |
Runs | 9 |
Runs residual | 0.0210283454186 |
Runs probability | 0.0353687020354 |
Amino acid sequence | MGRPLLPGHSSSQTGQCQSASSGRSGVAPEIHVSHLSQQVMMKLLLWSGLPVNSAQRAGP PTSLLSLNIPPTPP |
Secondary structure | LLLLLLLLLLLLLLLLEEELLLLLLLLLLEEEEELHHHHHHHHHHHHLLLLLLLLLLLLL LLLEEELLLLLLLL |
PRMN | - |
PiMo | - |