NONHSAT008721
Revision as of 19:50, 16 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT008721 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
713 nt |
Genomic location |
chr1+:200994270..200996204 |
Exon number |
3 |
Exons |
200994270..200994472,200994632..200994747,200995811..200996204 |
Genome context |
|
Sequence |
000001 CTGGAGAAGA GGTCTTGGTG GTATCCTGGA CCTTTTATTA GCATTTGAAT CTAGAGGAAG CTCTCCCTGG GGCCAGGGGA 000080
000081 TCACCTCTCC TGGACCAGGA GGTTAGCAGA ATGTTGCAGT CATATCCTGC AACATTCCTC CCCATCTTCC AACCAAAATA 000160 000161 ATTCGTGGGG AGGAGactaa cacatatgga ccacctacac aagGCTTCCC AGATGACCAC CAAGGTGGAA GGGATGATGA 000240 000241 TGTCCAGGCA GAAGGGAGCT AGGCCGGCCC AGGCTTTTCC TCTAGGCACA GCGGACTCCA GGTTCAGCCT TCCCGGATGG 000320 000321 TTAGCACTGG GCATTGGCAT TTGCAAAAAA ACTCTAAGCA TTAAGCAAAA CTTGTAGGAG TGGAAGATAC AGCGTTCTGG 000400 000401 ACCTCCAGTC CTAATACCCA GCCACACCCC AGCAGCTATG CATGGTTCCA TGGGAGAGCA GGCATAGCCC ATCCTGCTGG 000480 000481 CATATAGTCC AGCCATATCT TCCAATGCCC ACCTGGAGAC TAAGCCGAGT TCTGCCCAGC AACAGGAGCT CAGAGCTCCA 000560 000561 GAGAGCCTCT CCTGGGGTGC AGACTCAGGA GATCTTAGCT CAGGAGCAGA CTTAGCCTGA CTTCCTCTTT TATAGGAGGA 000640 000641 GACAGACTTA GTTACAGAGG AAACCAGAGT TGTTATAAAT AGCAAGGAAG GGAGAAACCT GCTATGGATT ACA |
Predicted Small Protein
Name | NONHSAT008721_smProtein_185:376 |
Length | 64 |
Molecular weight | 6886.1033 |
Aromaticity | 0.047619047619 |
Instability index | 43.6063492063 |
Isoelectric point | 10.2977905273 |
Runs | 8 |
Runs residual | 0.0179786200194 |
Runs probability | 0.0227654124713 |
Amino acid sequence | MDHLHKASQMTTKVEGMMMSRQKGARPAQAFPLGTADSRFSLPGWLALGIGICKKTLSIK QNL |
Secondary structure | LLHHHHHHHHHHHHHHHHHHHHLLLLLLLLLLLLLLLLLLLLLHHHHHLLEEHHHHHHHH LLL |
PRMN | - |
PiMo | - |