NONHSAT061178

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT061178

Source

NONCODE4.0

Same with

,

Classification

antisense

Length

737 nt

Genomic location

chr19+:11670276..11686382

Exon number

5

Exons

11670276..11670431,11672941..11673039,11674876..11674999,11675260..11675307,11686065..11686382

Genome context

Sequence
000001 GGCAAGTGAG GAATATGAAA TAACCTTATG GCTGAATCAG GGTGAAGGGG AAGCTTGTAA GCATGGAAGA CGCTCTACTC 000080
000081 AAACTAAAAA GTTCAAGTTC TGATCCAGCA GATGAAGAGG GAGGCCTGAG AGGCTGCTGT TCTAACTCGC TCCCAGCCGA 000160
000161 GTGTGATGGC TCATGCCTGT AATCCTAGCA CCTTGGGAGG CCGAGGTGTG CGAATCACGT GAAGACAGGA GTTTGAGACC 000240
000241 AGCCTGGGCA ACACGAGACG GGGCCTTACT CTGCTGCCTA GGCTGGAGTA CAGTGGCACA ATCATAGCTG ATTGCAGCCT 000320
000321 CAAACTCCTG GGCTCAAGCG AAACTCCCAC GTCAGCCTCC TGAGTACCTG GGACTACAGG TTCAAGTGAT TCTTCTGCCT 000400
000401 CAGCCTCCCA AGTAGCTGGA ATTACAGGTA CTGAGGATGG AGGACAAGGG GTCAGTGGAG ACCCAGCTTT GAGCAGAGCC 000480
000481 CTGCCTAAGG TCCAGGGCTC GATCTGGCCC TAACCACAGA GTCACCTTGA GGTATGTAAC CCCTCCTGGC TTCAATTTCC 000560
000561 TGACTTTTAG GAGTGTATTA ATCCTATTTC ATAGGTAGAG CACTTAGTAA GAAATTGGTG GCCAGGTGTG GTGGCTCATG 000640
000641 CCTGTAATCC CAGCACTTTG GGAGGCTGAG GGGGTGGATT GCTTGAGCCC AGGAATTTGA GACCAGCCTG GGCAACATAG 000720
000721 TGAGACCTTG CCTCTAC
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Predicted Small Protein

Name NONHSAT061178_smProtein_62:181
Length 40
Molecular weight 3989.3774
Aromaticity 0.0
Instability index 79.3923076923
Isoelectric point 4.07171630859
Runs 7
Runs residual 0.0107466063348
Runs probability 0.0374618315795
Amino acid sequence MEDALLKLKSSSSDPADEEGGLRGCCSNSLPAECDGSCL
Secondary structure LHHHHHHHHLLLLLLHHHLLLLLEELLLLLLLLLLLLLL
PRMN -
PiMo -