NONHSAT129336
Revision as of 07:09, 17 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT129336 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
547 nt |
Genomic location |
chr8-:139278062..139489683 |
Exon number |
5 |
Exons |
139278062..139278085,139323084..139323163,139370581..139370803,139380150..139380245,139489560..139489683 |
Genome context |
|
Sequence |
000001 gatttgggag ccaaaggaag gagctcttca cccagtgtag ggtatggttt gtgaaggtat ccctagagaa ggtgactctg 000080
000081 cggctgagct tgaaggaaga gaattggtag gtgacaaaga agagGTAATG AGCCAAAAAG ATCATGTCTG AAATACAAGG 000160 000161 AACGGTTGAG TTTTCGGTAG AGCTACATAA ATTTTATAAT GTGGATCTCT TTCAGAGAGG AATCTATTAA ATGTCCATGA 000240 000241 GGTGATATTT GTAAAGCACC TAGTAAAATA GAGGCCCAGG TTTTACAGTA CAAGCCAAGA GGACCCAAGC CCTCTATGGA 000320 000321 CTACTCCATT GATTGTAATT GAGACTCTGA ACCAAACATC CTCAGCTGGT CAGTGCCAGG GCTAGAACAG ACTGTCGATC 000400 000401 TGGTCAAGCT CTGAATGTAT GTTCCTCTCT ACATTTTATG CAGGTATTAC CAGATCCGAG TGACCTTGAA GGTGTCTTCA 000480 000481 AGGATCCCCC ACAGACTGAG TGCCTCCATC GCTGGGCAGA CAGAGAGCAG CAGCCTGCAT TCAGCCT |
Predicted Small Protein
Name | NONHSAT129336_smProtein_143:229 |
Length | 29 |
Molecular weight | 3350.7513 |
Aromaticity | 0.178571428571 |
Instability index | 44.7289285714 |
Isoelectric point | 4.83099365234 |
Runs | 6 |
Runs residual | 0.0110663983903 |
Runs probability | 0.0387740681859 |
Amino acid sequence | MSEIQGTVEFSVELHKFYNVDLFQRGIY |
Secondary structure | LLLLEEEEEEEEHHHHEEEHHHHHLLLL |
PRMN | - |
PiMo | - |