NONHSAT130021
Revision as of 07:11, 17 October 2014 by 124.16.129.48 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT130021 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
6602 nt |
Genomic location |
chr9+:3526119..3532720 |
Exon number |
1 |
Exons |
3526119..3532720 |
Genome context |
|
Sequence |
000001 GGGATTCCAC CGCAGGACTC CGAAGAGGTG CGCCTATGCT TGGCTGGGGC TGAGGTCACC AAGAGTCCTC TCGGAGGGAC 000080 000081 GTTACTACAC GCGCTGGCGA GGCCCAGGAG TCGTGGTGCG AGGGGTACTA TCTGTGAAAC GAGGGCTGCC TGTCCCAGCA 000160 000161 GCCAGCTTTG TACAGAGACG TCCCGGAGCC ACGAGAGAGT AACGGCTAAC CCGGGGGAGG GGGTGGCGAG GGTGATTCCA 000240 000241 GGCACTTTGT GAAGAAACGA GCTATGGCGA GGGAAGAATC CACTTTGAAG AGCGGCCCCC GCCCTGCCCG ATACGTTACT 000320 000321 TCCGGGGCGG GGCGGGCAGA GGGGCCCGGA TGTGCCGCCG CTTTTTAGTT TCTGAGGCGC CGGCGGTGTT CCTGGTAGCG 000400 000401 TCAGCCTCCT GGCTTTTCCT TTTCCTGGAC GCTTCAGGGC TCCGCGGCCT GCGCTAGACT GGAGGGTCCG CGTCACTCTC 000480 000481 GCCCTCCTGC TTTCCGCGCT CTCACCCGCT CCCGCCTCCT GAGGGCACGA CTTGTGGAGG AGCGCGGGCG GCGGGGCGTG 000560 000561 AGCGAGCTGC CTCTGCCGCC ATCTTAGAGA AGGCGAGCGT GGGGTGTGCG TGGGCGCGAG TCGGCCTCCC GCGGTGCCGC 000640 000641 CGCAGCGTGG CGCGGAGAGG TGAGGTCCAA GCGTGTCCGG CCCTCACTCC ATAACGAAAA AGCGAGGTCA TCACTCCCTA 000720 000721 TCTACAAGGG ATGGGAGTAA GTGCCTGTAG AGAGCAAGAA ATTGCCCTGC CCGGAGGCTG AGAAAGCGCA TTTGGCGGTT 000800 000801 CCCCTCGACG GAAGGCGTAG AGGGGCGGGG TAGCTTACAC CTGCCTGCGA TACCATCCTG TTAGTTTCTA GTTCTGTTAG 000880 000881 TTTCAGCCCT TAAGTGCTCA CCCCTCTTTA AAGACCGAAC TGGGAGTTGA GCTCAAGCCC GGATCCTGTT ACCTGCCGTG 000960 000961 CTCTCATCCC CCGTTACTCA GCCTACTGTA GCTGAGGGTC TTGCTGTTTG TGGCTGTATT GAGATAGACG AATGGCTTCC 001040 001041 GTCTGTGTTG AATGTTGTTA ACACAACCTG CCATCTCAAA CACCCGTTGA TAAGGCACAG CCTGTAATGC CTCATGGTTC 001120 001121 AAACAGACTC CTCCAATTCT CTGCAGACTC GAGTCCAGCA GGCACATGCC CCCAGGCCCT GCCAATACCC AAAATCTCCC 001200 001201 AACATTTGCC GCTAAGCTGC TTAACCAGGA CAATGacata gtagaagtag agccttagga agtcagttct cctcttgagg 001280 001281 cttaattttt gcacctgcaa gtaagggatt tgggcCGGCA TGCGTTCACC AGCGCTAAAA TAAtactgag ctcattctgt 001360 001361 gtcccagaac tggtgctaag tgttttacat acattatctc atgtaatccc aacaacacca gtgttaggta atattcgcat 001440 001441 ttgaggaaaa acaggccgag agTCCTAAAA GTCGGTGGTT TTAGTTTATG GCTGCGTGCC ATAGAATACA AGGTTACCTT 001520 001521 GTTTTAGGAA CCAGCTACTT TGGGTACGTT TTTAAAAGTA ATATTGTTGC CTTTGATAAT CTCATGAGTT AGAGATGTTC 001600 001601 TTACAATAAT AATGTGTTGC AGTAGTGAAC AGTGGTGAGC CTAGTGCTAA AGCTAAAAGG TTTCCTGACC CACTGTGGTA 001680 001681 GTAAGGGCTT CTAGTCAGAC AAATGATTGT GTGGTGACCA GTGTGGGTCC CATTTGACAT ACAGATGGGA AATGAGGTAT 001760 001761 ACGTTCCAGC TTTATGAAAA CTggtagtcg ttatgaatat tctctttatt atatttactg ataaagtcct cattcctata 001840 001841 atggtgtgta gggctgtatg ttcacactac atggctctct gaatagcttt gtttttttaa attccattgt ctgttatagt 001920 001921 ttgcctgtcc cgtctttcat tgtcagctgt tgctttttat ttttgtcagt gaacatagtt ctattatcct taccgccctt 002000 002001 ttaatttatt gctcttaatc tgcaggcaag aaaaccacat agtgaacctt gtgcaaaact gtatctcaag agtataaata 002080 002081 ggtacttcga gggactatta aaaaataagt gcaacccttg tgctaggaca ttatagaatc agttttaagc tgcttaaatt 002160 002161 tttttttttt tttttttttt ttttttttGC CTTACAGATT TGGTCTTTTC CAGAGTTAGG AATAGATAAA TTTCCTGAAG 002240 002241 TTAATTCTTG AAAATTTAGA ATTTAGAATA TTTTCCCATG TTTTAGGATA CTTGATGATG ATACAATTCT AACCATATTG 002320 002321 AGGTTAATAT TTGAAATGTT AGTGTTACTG CCtgataggg tttggctttg tgtccccacc caactctcat gtgaaatcgt 002400 002401 aatccgaaag tgttgaagga ggggccctgt gggagatgat tggatcctgg gggcagtttc tgatggttta gcaccatccc 002480 002481 actagtgctg tttcaagagt gacttctcac gagatctgct tgtttaaaaa tatttaccac tacccctctc tcacctgcca 002560 002561 caatgtgaag aaagtccttg tacccttcgc cttccgccat aatggtaagt ttccgtgaga cctcccagtc atgcttcctg 002640 002641 ttaagcctgc agaactgtga gtcagttaaa cctcttttct tcataaatta cccagtctcc ggcagttctt tatagcagtg 002720 002721 tgaaaaggta caaatacaCC ACCACACTGA ATCAGATGAC CAAGATACCA GTTCAAGCTA TAGAATCGAA AATACGGATT 002800 002801 TTATATGCAT GTATTGTTTA ATACTGTAAT TAGTTACAAA AGAACCCAGA AACCTTTTAA CCCATAGTTA TTGCTTGTAG 002880 002881 GATTTTTTTT AGCCATTTTT TAAAGCTGCA TAGATGCATC TTCACATATG TTGCATGTAT GTTTCAGAAA TAAATTATTT 002960 002961 GCTAAGAAGT CACAGAAAAG ACCCAGTATT GGACCACTCT AACAGTTATC ACCTATTATA GTGCAAAACA CACTGTGTGA 003040 003041 TCAATAAAAA AAGGTACATA ACCAAGCTAA AATTGGGCAG ACATAGTTCC TGAATGTAAA ATGTTCAACA TTATCTATTA 003120 003121 ATTTAGAATG TTGTGTTTTA ACTTGGATTG TTTTTTTCTC TCCGATCAGA ATGATTGGAA GAGACATGGA ATAACACATT 003200 003201 TGTATCTGAA CTACTTGAAG AAAAATCTGA AGCCCTGATG ATATATATAG ATTGTGTATT TCATAAGTTA CTTTAACACA 003280 003281 TTCGTAGTGG TAGATTTCTG TATTATCTAT TAGAGTGTTT TTGCCTATTC ATATCTACTC CATATTCAAG GACTAATAAG 003360 003361 TTATTTCATT ATTATACTTT AAAAAAGAAA GGATGCATAT GAAAAGATAA AATAGTGCTA TGTGATAGGC TTGCTTCTGA 003440 003441 AAAATAGTAT GAGAGTTTGA AAAGTAATGT ATGCTGTGGC ACCTTATTGT TGAATTTGTG GTGAATCTTT TTATGAGAGA 003520 003521 AATCACACCT GTTTTAAATT TTTTCATTTG ATTATATCCT ATTTTCTTCA ATTGAGAGAG AGATGTAGAG TCTTGGGTTC 003600 003601 TCTTATATAA AATGAATGGT TTCATTTGTA CCAATATTTA TTGAGCACTT ATGTGGAATA CTGGATAATT TTATTACTCG 003680 003681 ATTGCTAATT CCCTTTACTA GATCTGAAAT TCTGTGGATA TGTGATAATT ATTTAAAAAT GATAAGAGAG TGATAGGGGC 003760 003761 CAAGGTAATT CAAAACTGAA CATAATTTGC CACTATTCTC TGGAGCACCC TCAAGCCTCC CTATCCCCAC CTAAAGTATG 003840 003841 ATTTGGTTTT GAAAACAGTG CAATAATTTT TTCTGGTAGA TTTGTCTTTC TGTGTTTTCT TTAAGTAATA CAAACCAGCT 003920 003921 GATTACTCGG CAGTTCTGAA GAGTGTGTGT GGCTATGTGT ACACACGTTT GTGTGCATGT GTATGTCTTG GAATTACATT 004000 004001 TTTACTCCAG CACAGAAAGA TGATTATAGA ATCATAAGTT GACTACCTTT GCTTAACACC AAATTACCTT TTGATGTACA 004080 004081 CATGCAGCTT TAAAAAAAAA AGTCTGGggc cgggcgtggt ggctcacgcc tttaatctca acactttggg aggccgagcg 004160 004161 ggtggatcac ctgacatcgg gagttcgaga ccagcctgac caacatggag ttaccccatc tctactaaaa atacaaaatt 004240 004241 agctgggtgt ggtggcacat acctgtaatc ccagctactt gggaagctga ggcaggagaa tcgcttgaac ctgggaggca 004320 004321 gaggttgcgg tgggccgaga tcgcaccatt gcactccacc ctgggcaaca agagcaaaac tcggtctcaa aaaaaaaaaa 004400 004401 aTAGTctgga aacaattcaa atgtatatca ataggaggat gggaagacaa attgtgggcc cagcacaatg acttaacacc 004480 004481 tgtaatccca acactctggg aggccaagcc atgaggatca ctggaggcca ggagtttgag actagcctga gcaacatagc 004560 004561 gagactctgt ctttacaaaa aaaaattaaa acttagctga gcatgttggc acatgcctgg agtcccagct acttgggagg 004640 004641 ctgaggcaag agaattgcat gaatccagga gttcaaggtt gcagtgagcc gtgatcacac cactgtactt cagcctgggt 004720 004721 gagagcaaga ccttgtcttt aaaaagtaaa agagtaaaac aaattgtgat acagtcatac gatggagtat tattgagcaa 004800 004801 gtcaaaggaa aggactgctg atacaacacg gacaaatctc aaaaacattg catttggcaa aagaagccag acacagagta 004880 004881 catagcatat gaatccattt atataaaatt taagaacagg aaaaagtaat ctgtgtttag tatcttctta tggcagaggc 004960 004961 agtaggttgg gattttagtg gaaaggatta tgagggaaca tggtaggatg gtgaaaatgt tctgcactgt ctcagctgca 005040 005041 ctaatgacat atagctatta aaatctatta attaaaacaa aattcatttc cactgtcaca ttagctacat tttaaatgtt 005120 005121 caatagccac atgtggctac tgcctactaa gttggacagt gcaaatacag acttctgtta tctcagaagt tctactagag 005200 005201 agttctAGTC TAGACCTTGT TTTATGCACA TGTTTACATT TTTCAAAATT GTAATTAATA TGCATTGTAT GCCAGTAATA 005280 005281 CCTGCCCCCA AACCCTATAA ATCATTAATA GAATTTTTAT TACTCTATTT TAATCTACTA ATTAGCCCAT GTTTTCCATA 005360 005361 ATATTTTTGT TCAACCCTGG GGAGAAAGGA TAAATAGTAA AATTCTTGGC AAATTTTCAA ATATGTAATT GTGACATACA 005440 005441 ATAGATAGCA TTGATTTTCC GCTCCAAAAA ATGAGTTCTG CTGCTTTATA ATTTTGAATG CATCTAGAAA CAAGAAATTT 005520 005521 CTTTTGAGGG CTTAAAGTGA ACTCTAGATG AATACAGAAA AAATTTTTTC TATTGGAATC AAGTATCTTA AACGTGGCGA 005600 005601 TCATACAACC TTCTTCTAAG GTAACACTTA AGAGCGTTTT GGGAGATTTT GGTGCTAGCT CTATGACTAG GTTTAGAAAG 005680 005681 TCAAATAAGC TCGGTAGGTA ACACTTCAGA CTCAAGCCTT TTGGAAGTAG AAGAAAACTA AGTTTGTAAG TGAAGGATAA 005760 005761 AAAGACCTGA ATGATCTCAA TTCTAAAATT CTGATTTTAA TGGATTTTAA GAGATGGAAT ACCAGGTGAA TTGATTCAAA 005840 005841 ATATTAAATA TATGTGTTTA TATAGTACTT CAGTGAAATT AAGAAAAATT TTTGGTGGAG TAAGTACCTT AATAATGTTA 005920 005921 ATAAATATTT CTACCAGTGT TTTTTAAGAC CTTTGTGAAC CCCAAGTAGA TTTTTACAAG ACAATGAACT TTAACTGTTA 006000 006001 AAGATTAATT ATTATAAATG AATCAGCAGT TCATGTCAAT AATATGTGCT GGAAAGTATT TTCTCAATTA TTGTCAATTA 006080 006081 TATATAAAAA ATGATTTTAT TTGATCCAAA TTCTTTAACT GCCAAATTCT TGTTTTCTTt ctctctctct ctctccccct 006160 006161 ccctctctct ccctctccct ctctctccct ctctctctgc cccctccctc tctccccacc tttccctctc cctctgcctc 006240 006241 tctctcttcc tctccctctc cctctccact tcctccctcc ccttcccttc ctcccttcct ctacctTTTT TTTTTCTTAT 006320 006321 AATGTAATAT GTAGTCTGGA GAAAACATCT CCCAAGTTCT GTTGGGCCAT TCTCCCTATT GGAAGTATAC TAATAGTATC 006400 006401 TGCTCACTGG AACATGCCAT ATATGT |