NONHSAT089191

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT089191

Source

NONCODE4.0

Same with

,

Classification

sense

Length

1028 nt

Genomic location

chr3-:41288090..41319642

Exon number

4

Exons

41288090..41288483,41290980..41291065,41292414..41292615,41319297..41319642

Genome context

Sequence
000001 aggcacggga gggaatctcc tggtctgctg gctgctaaga ctgtgggaaa agtgcagtgt ttgggcagga gtgtcccgtt 000080
000081 tttttcaggt acagactatg atggcttccc ttgggtagga aagggaaatc ccccgacccc ttgtgcctcc caggtgaggc 000160
000161 gacaccccgc cctgcttcgg cgcactctcc atgggctgca cccatgtgca tcccatgaga agaaccaggt acctcagttg 000240
000241 gaaatgcaga aatcacctgt cttctgcatc gatctcactg ggagctgcag agtagagctg ttcccatttg gccatcttgg 000320
000321 aaGCAAAAAC CCCtagggtt tttaagCCTT GTGGATGAAA GTCATCTTCT GATTTATTTG CAACTTGTGG GTGATTTCCT 000400
000401 GGGAGCACAG CCTCTGCACA CAATCTCATG GCAGGGCTGG TCGGGGCACT GAGCCTGGAT GTAGTCAGCT GACCTGTTTG 000480
000481 AGGCAGTTCT GAGAAAAATG AAGTGGGAAT CCTCACTGAA GACGCCTGAT GGGGAGTGTA CCTTCAGTAT CACCTCCAAT 000560
000561 GAGAAGCACT TGGAGAGCCT CAAGAATGCA GGCAGCCTCC TGCGGGCTCT GGAGCGGCTG GCCCCTGGGA GTGGTTCATT 000640
000641 TGCCGACAGT GCGGTGGCTC CCTTGGCCCT GGAAATCCTC CAAGCCGTTG GGCACTAGGC AAGAAGGTGC TTAGCACAAG 000720
000721 CCCGCCCTGT GGCCCCAGCC CTCGGATGCA TAAGCAAGGT CAGCTCCCAG ACACCTTTGC CACATCCCCT CACAGCTGTC 000800
000801 TTTGGACCTA ATAAAGTCAG CTTAACCCAG AACCTGGTGG CCCAAGTGCT CACTAACCCC AGGGCCTAGA AAACTGACTC 000880
000881 AGAATGGACT TCCTTGGTTC CTGTGGAATG CATCTGGGAA GCCCAGGTTT GTTAGCTGTT CTCAGAAATG TTCTTTCCCT 000960
000961 CTCTGTGTGG GCCAGGTGGG CTAAGGTTAG CACTGCCTGT GGTAATAAAG CAGTGGATGC AAAGCACA
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Predicted Small Protein

Name NONHSAT089191_smProtein_497:697
Length 67
Molecular weight 6981.83
Aromaticity 0.0454545454545
Instability index 47.0878787879
Isoelectric point 5.51971435547
Runs 9
Runs residual 0.0142442387951
Runs probability 0.03293489568
Amino acid sequence MKWESSLKTPDGECTFSITSNEKHLESLKNAGSLLRALERLAPGSGSFADSAVAPLALEI
LQAVGH
Secondary structure LLEEELLLLLLLEEEEEELLLHHHHHHHHHHHHHHHHHHHHLLLLLLHHHHHHHHHHHHH
HHHHLL
PRMN -
PiMo -