NONHSAT089191
Revision as of 00:29, 17 October 2014 by 124.16.129.48 (talk)
Please input one-sentence summary here.
Contents
Annotated Information
Transcriptomic Nomeclature
Please input transcriptomic nomeclature information here.
Function
Please input function information here.
Regulation
Please input regulation information here.
Expression
Please input expression information here.
Allelic Information and Variation
Please input allelic information and variation information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this lncRNA
Please input related labs here.
References
Please input cited references here.
Basic Information
Transcript ID |
NONHSAT089191 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
sense |
Length |
1028 nt |
Genomic location |
chr3-:41288090..41319642 |
Exon number |
4 |
Exons |
41288090..41288483,41290980..41291065,41292414..41292615,41319297..41319642 |
Genome context |
|
Sequence |
000001 aggcacggga gggaatctcc tggtctgctg gctgctaaga ctgtgggaaa agtgcagtgt ttgggcagga gtgtcccgtt 000080
000081 tttttcaggt acagactatg atggcttccc ttgggtagga aagggaaatc ccccgacccc ttgtgcctcc caggtgaggc 000160 000161 gacaccccgc cctgcttcgg cgcactctcc atgggctgca cccatgtgca tcccatgaga agaaccaggt acctcagttg 000240 000241 gaaatgcaga aatcacctgt cttctgcatc gatctcactg ggagctgcag agtagagctg ttcccatttg gccatcttgg 000320 000321 aaGCAAAAAC CCCtagggtt tttaagCCTT GTGGATGAAA GTCATCTTCT GATTTATTTG CAACTTGTGG GTGATTTCCT 000400 000401 GGGAGCACAG CCTCTGCACA CAATCTCATG GCAGGGCTGG TCGGGGCACT GAGCCTGGAT GTAGTCAGCT GACCTGTTTG 000480 000481 AGGCAGTTCT GAGAAAAATG AAGTGGGAAT CCTCACTGAA GACGCCTGAT GGGGAGTGTA CCTTCAGTAT CACCTCCAAT 000560 000561 GAGAAGCACT TGGAGAGCCT CAAGAATGCA GGCAGCCTCC TGCGGGCTCT GGAGCGGCTG GCCCCTGGGA GTGGTTCATT 000640 000641 TGCCGACAGT GCGGTGGCTC CCTTGGCCCT GGAAATCCTC CAAGCCGTTG GGCACTAGGC AAGAAGGTGC TTAGCACAAG 000720 000721 CCCGCCCTGT GGCCCCAGCC CTCGGATGCA TAAGCAAGGT CAGCTCCCAG ACACCTTTGC CACATCCCCT CACAGCTGTC 000800 000801 TTTGGACCTA ATAAAGTCAG CTTAACCCAG AACCTGGTGG CCCAAGTGCT CACTAACCCC AGGGCCTAGA AAACTGACTC 000880 000881 AGAATGGACT TCCTTGGTTC CTGTGGAATG CATCTGGGAA GCCCAGGTTT GTTAGCTGTT CTCAGAAATG TTCTTTCCCT 000960 000961 CTCTGTGTGG GCCAGGTGGG CTAAGGTTAG CACTGCCTGT GGTAATAAAG CAGTGGATGC AAAGCACA |
Predicted Small Protein
Name | NONHSAT089191_smProtein_497:697 |
Length | 67 |
Molecular weight | 6981.83 |
Aromaticity | 0.0454545454545 |
Instability index | 47.0878787879 |
Isoelectric point | 5.51971435547 |
Runs | 9 |
Runs residual | 0.0142442387951 |
Runs probability | 0.03293489568 |
Amino acid sequence | MKWESSLKTPDGECTFSITSNEKHLESLKNAGSLLRALERLAPGSGSFADSAVAPLALEI LQAVGH |
Secondary structure | LLEEELLLLLLLEEEEEELLLHHHHHHHHHHHHHHHHHHHHLLLLLLHHHHHHHHHHHHH HHHHLL |
PRMN | - |
PiMo | - |