NONHSAT113586

From LncRNAWiki
Revision as of 01:55, 17 October 2014 by 124.16.129.48 (talk)
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Transcriptomic Nomeclature

Please input transcriptomic nomeclature information here.

Function

Please input function information here.

Regulation

Please input regulation information here.

Expression

Please input expression information here.

Allelic Information and Variation

Please input allelic information and variation information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this lncRNA

Please input related labs here.

References

Please input cited references here.

Basic Information

Transcript ID

NONHSAT113586

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

677 nt

Genomic location

chr6+:74779167..75400443

Exon number

4

Exons

74779167..74779304,75056791..75056845,75383780..75383864,75400053..75400443

Genome context

Sequence
000001 GTCTGTGGGA ATTATTTCCT CCCATTGGTA TTAGATTATA TTTTTCCAAG TCAACTCTTC CTGGCTGCCC TTCAAGGTTC 000080
000081 TAAAGATTTT CTACTGTTGT AGTGTAACTA GTAAGAGGCA AAACCATGAG AATCAGAGAG AACTTCCCTT CATGATGCTA 000160
000161 TGCAATCCCC AGGAGAAGCA CGTTGAAAGC TGAAAAGAAG ACTGACTGAG ATGTGTTGGC GGGCTTCTCA AGATCCCTAT 000240
000241 CGATGGCAGA ATGCTGACAT GAGTTGCCCA TAGTCCAGGT TTCCCAATGT AGCAGATGAC TCTAGCGGCT CCAGCTTCAG 000320
000321 CATCATCTTA AGTTCAAGTG AAAAGGAAAA GAGAATCTCT TTTTCTTCAA ACAATTTCAA ACTAAAATCT TGAGTCTGAC 000400
000401 TTTTCCTGGC CAGAATTAAG CTTGTACTTA TCCCTGAAAA ATCATCAATG CTACAGTGAT GAATTTACCA ATTGAGGCAG 000480
000481 AATTTAGGTC ACATGACGCT CCAAAGCCTC TTCAAAACCG CATGACTCAG AGTGAGGCAG AAGTATTTGG GATATTTGCA 000560
000561 ACAGGAGAAG GGTAAATGAA TGGAGAGTGC CAAAACAACT TATGTCAATT ATACAATTAT AAATACAACC AAAATAAAGT 000640
000641 ATGGAAATCA GTATTTTCAC CTATCTTAAA AAAAAAA
[back to top]

Predicted Small Protein

Name NONHSAT113586_smProtein_458:574
Length 39
Molecular weight 4219.6676
Aromaticity 0.0789473684211
Instability index 57.0315789474
Isoelectric point 4.69805908203
Runs 8
Runs residual 0.0379155124654
Runs probability 0.0317965023847
Amino acid sequence MNLPIEAEFRSHDAPKPLQNRMTQSEAEVFGIFATGEG
Secondary structure LLLLEEEEEELLLLLLHHHLLLLLLHHHEEEEEELLLL
PRMN -
PiMo -