NONHSAT113962

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT113962

Source

NONCODE4.0

Same with

,

Classification

intronic(AS)

Length

755 nt

Genomic location

chr6+:90524428..90525182

Exon number

1

Exons

90524428..90525182

Genome context

Sequence
000001 ATGCACCGGA GATCTCTCCA GCACCAGGAG CAGCCGCTGG ACAGCAAGGA GCGGCAGCCT ATGGTTAGCC ATTGGGAGAT 000080
000081 CTCCGCCAGG GCCCTGGGTT CTCTGTGCAG ACAGTTCCAA AGAAGGCTGC CCCTAAGAGC CGTCAACCTC AACCTCCGGA 000160
000161 CAGGTACCTC CTAGAAACCC CTAGAAACCA GGGTCAGGGC AGTAAGAGAC TCCAGGCTGC AGCTCGCTCA GCTAAGAGCA 000240
000241 CCCTGGGTGC CATGTCACAG AGAATCCAGG AGTCCTGCCA AAGTAGCACC AAGTGTCTGG TGGAGACCCA GGTGAAGGCC 000320
000321 AGGAGGAGGA AGAAAGGGGT ACAAAAGGGA GAGCAGTGTC TCCCCAACTC ACAGCCTGAG CCAGAAGAGG ATTCAGCTGT 000400
000401 ATGGAGCTGC CCCTGACCAC TCAGCTACAG ACCCCTGTGC ATCACCACCT CTCTACCTGG ACAGGCTCAC GTGCCTACCC 000480
000481 TCTACGGCAG TGGAGGCGGG AGACTGCCTT CCAGAGCCCC TACTCCTTGA CAGAGCTCCT CTGCTCTCCC AGCGCATCTG 000560
000561 ATAGTGACCT AGCACCTATG GGGAGCAGGA ATTCGGCATC TCCAGAAGCT GTCCCAAGAG CTGGATGAAG CCATTATGGC 000640
000641 GGAAGAGAGT GGTGAAATGA CACTCTCATT CATGACTGAG GAAGTGCCCT GCAGGAAACA AGCCCTGTCT GACCACCAAG 000720
000721 GCTTCGTACC CCAGAATGTC TGTGCTTCCC CATGA
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Predicted Small Protein

Name NONHSAT113962_smProtein_251:415
Length 55
Molecular weight 6106.8404
Aromaticity 0.0185185185185
Instability index 111.125925926
Isoelectric point 8.45867919922
Runs 10
Runs residual 0.0224932249322
Runs probability 0.0479243949832
Amino acid sequence MSQRIQESCQSSTKCLVETQVKARRRKKGVQKGEQCLPNSQPEPEEDSAVWSCP
Secondary structure LLLHHHHHHLLLLLEEEHHHHHHHHHHLLLLLLLEELLLLLLLLLLLLLEELLL
PRMN -
PiMo -