NONHSAT114082

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT114082

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

1311 nt

Genomic location

chr6+:97730202..97754402

Exon number

3

Exons

97730202..97731373,97753870..97753972,97754367..97754402

Genome context

Sequence
000001 CCGCTGCAGA GGTAGGATTC TCCAGAAAAA TGTTTTCCTC CTCCTCTGTT GTCAACAGCA CAAGAAAAGT AAGGAGGTTT 000080
000081 GCACCATTCC GTCCCCAGCT CCAGCTCTAA GCTGTCAGTC AGGAACGTCG ATGCAGCAGA ACAGTTCTCC ATTGTTTACT 000160
000161 TCATGTTCTG AAACACTTGG GGTTCGTCGT ATCATTAAGG GCTCCAAAGA GAAGGTGTGA AGAGATTCCT GTTGGGGGGG 000240
000241 GGGGGGTGGG GCCGAGAGAG TGGGGATTAC TTCAGAAAGT TCTCAAGACG TCCGCCAGCA GGAAGGAAAA ACAAACGAAC 000320
000321 AAACCCAGAG GCCAAATTCC CAATTCCCCC TCGCCCTCCG TCCATCAAGG CTGTCAGAAC TTAAGACAAA ATGCACAACC 000400
000401 AACTGGCTGT GGCAGGGACC TCGAAATCCG GCCACTAAGT CGGGCTCTGC AGCCCAGGAC AAGGTGAAAA GCAAAGAAAT 000480
000481 GTCTGCAGGA CATAGCGTCC CGGGCTTGCC TAGAACTGCG CCCTCCGCAA CGTTTCTAAA CCACTCTCCG CCCGTTTCCC 000560
000561 AGCAGCAGGG TGGAGAACGC TCCCTCCCCG GCTCGGGGTG GAAATTAGGA AAGCAACCCC TAGGGCCAAC CCCGACCCTC 000640
000641 CAAGGAGGAG GCGAGACCCA CCAGGCCCAC GCCTGGCAGC ACTCGGGCGG AGAAGGCGGG GTGCCGGTAT CCCGCGTACC 000720
000721 CGGCTGCAGC AAGGACCCGG GGCGTCGGTT ACCCGCGGTG CCTGTCGTAC CCGCTCACAT TTCCAGCTCC CGAAACCTGC 000800
000801 CTCCTGTGAC CCAGACCACC AACAGGAATC TTTGGGGTCT AAACCGCAAA CAGGCGAAAT TCCCGCCACC GCGCGCCCGC 000880
000881 GCTCCGGAAA GGCGGGGCCA CGGCGCAGCC CTCCCCCGGC TACCAATCGC CTCGCGATAT CTGCGCGGAA ACAGTCGGAG 000960
000961 CCCCACGAAT TCTCGCGAGA GTCCGTCAGT CCGGGACGAG GTACTGAGAA ACTTTTTTTT TTGTACCTTT AATTGGTGCG 001040
001041 TTCGGCTGAA AGGCGGGGCC TGGTAAAAAA AAAAAAACAG AACTGCTGCT GAGGCGGAGG AGAGGACTTA AGGACTATGG 001120
001121 GTTTATCCTC TGGCCGGACC AAAGAGAAGA TATTTACTCC AGTGAGTGCG AACAGACACT CTCTGCGTAG GATCATCATG 001200
001201 CCGAGCATAA ACTGGACTTT CCCACTTGCC TGGCAGGAGT CACACAGATC CCTGCGTGCT AAATGAACAT CTGAGCAGAG 001280
001281 AAGGATGAAT GCTGCATAAT TAAGTACAGT A
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Predicted Small Protein

Name NONHSAT114082_smProtein_29:109
Length 27
Molecular weight 3039.5157
Aromaticity 0.115384615385
Instability index 92.7730769231
Isoelectric point 12.4790649414
Runs 5
Runs residual 0.0169946332737
Runs probability 0.0340399222752
Amino acid sequence MFSSSSVVNSTRKVRRFAPFRPQLQL
Secondary structure LLLLLLEELLHHHHHHLLLLLLLLLL
PRMN -
PiMo -