NONHSAT133724

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT133724

Source

NONCODE4.0

Same with

,

Classification

sense

Length

1086 nt

Genomic location

chr9+:103947317..103950308

Exon number

3

Exons

103947317..103947537,103947732..103947839,103949552..103950308

Genome context

Sequence
000001 AATTCTCTAG GTTGCAAATT GGGAGGATTA GGAACAAGTA AGAGAGATCC ATGCAGGATG GACAAGAAAA AAAAGTTTTA 000080
000081 TACCAAAAAT TGTATTTCAT GGCATTAGGG CAGTCTACTG GGGTAAGGCA CTATGCAGTA CTAGGCAATT AGAATTCTAT 000160
000161 TCACTAGCTA TGTGCACAAG CGGCTCCTGA CCTGGTCATT TTGGCTGTAA AACTATTCAT GCCTGGACAG TTTTTGACGG 000240
000241 TGCAGTCTTG CTATATGGTG TGAGAAATGG CTGTAGGAAA CAACACTCAA CGAAGTTATT CCATCATCCC GTGTTTTATA 000320
000321 TTTGTTGAGG AGGAAGCAAC CCTCAAAGTG AGATGTTTAA TTTATTGCTG GAAGCTGTAG TCTCCGAAGA TTTTCAGCTC 000400
000401 TCTAATGTGT GAATGAAGAG CTTGGCCGGT GGAGCAGCAA CAAAGGAGAT AAATTAGTTC TTCTGTAGCT TACCCTGACA 000480
000481 CAAACATAAA TAGAAGTCTA AAAATCTGGG AGAGGAAAGA TGGTTTATTC TTTTTCTTGT TGTATTGTTG TTCTTATTTT 000560
000561 GCATGGAAAT TCTCTTAGAA CTGTCTTAGA AATAGGCAGG CAAAAGGGAA GGGAAGTAGG ACACAGAAGA CATTGAGTGG 000640
000641 GAAGGAGGTG AATCTCAAAG TGGCTCTCAT GATTCTCATG TATttcattc accaaacact tattgtttac ctatattatt 000720
000721 ccaggtacta taacaaggat atcacaaaac ttggtAAAAA ATGTCAACTT GACCAATGAA TATCTTTTCA CTGTTTTTTT 000800
000801 AATTATGAAA GAATTTAATC ACAGAAAATA ACTGACATCC CTGCACCTAC CATCAAGACA AAATCTTAAA GTTTTGTCAT 000880
000881 ATTTGCTTCA AATATTTTTG TCAAGGAAAA TAAAATGTTA CAGATATGGC CAAAATCCTA TTGTCCTGAA GCCAGAAGTC 000960
000961 ATTATATGTA TGAAGTTTGG GGCTTCTTTT CCCTACATGT ttcccatgca tggtttatat tttcctacat atgtatatat 001040
001041 tcataaatat tttaggaaaa ttttacataa atgacactat gctgaa
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Predicted Small Protein

Name NONHSAT133724_smProtein_914:1045
Length 44
Molecular weight 5325.126
Aromaticity 0.279069767442
Instability index 57.8674418605
Isoelectric point 6.80047607422
Runs 4
Runs residual 0.0642801149726
Runs probability 0.0440734852501
Amino acid sequence MLQIWPKSYCPEARSHYMYEVWGFFSLHVSHAWFIFSYICIYS
Secondary structure LLLLLLLLLLHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEL
PRMN LLLLLLLLLLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHL
PiMo iiiiiiiiiiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTTo