NONHSAT091690

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT091690

Source

NONCODE4.0

Same with

,

Classification

sense

Length

4639 nt

Genomic location

chr3-:126156444..126162252

Exon number

2

Exons

126156444..126157304,126158475..126162252

Genome context

Sequence
000001 CAAGGAGGGG TGAGTAAGTT TTGTGCCCCA GGCACCTCTC TTGCCCCAGA CCCAGCCCTG CTCTTCTGTC TGAAGCAAGT 000080
000081 AGAGCAATTA GAAAAAGAGA AACCAGGCGT GGAGAACAGT CAGAGATGAT CCAGAGCGAG GGTTGCTGGG TTTTCTGGAA 000160
000161 CACTGATGGA TGAACAGAAA GGAAGTATTT TGTAATGGAA GTGCATCTCC CTGCAGTGAG GGGGAACTGA ATCTGTGTTA 000240
000241 CCCAGAAACC TCCTGGTTAG CATTTGCACT TCAAAGAAAA AGAGCCCTGA GGCACCCAGA AAAGACAGCA GGCTGTGCCT 000320
000321 AAGTACAGAG GACCCAAGGT TTGTGCACCC AGTTGGCTTG CCTGCTGAGT GTGAAGCTCT CCGGGACCCA GGGCACTGCG 000400
000401 GAAGACAGGA AGGGATCTGG AGTGAGGTGA GCAGGTCAGG GAGACAGCAT ATGCAGGGCA AGTCAGCTCT CACCCCATGG 000480
000481 GCTGCTCAGA ACCTTCCTGT CAAACAGCCT CGTAAAAACA GCCTGCCTTG GGCAGCAGGG TCACCCAATT GAATACTTTT 000560
000561 ATTAGGAATA ACTTATATGA TAGTCATTGT ACAGTTGTTT TTTTGAAGCC GTTCATAGCT GGATCCCACA CATCCAGGCA 000640
000641 GGGATGTGTG GGCAGAGCAG TGACAGTGCC TAAACTCCTT GGCACTCgcc agtcactgtt ctaagttttg atcacatatt 000720
000721 tcctatgaaa tcctctccaa aaccttccga ggttgggact agcattccca ttttacaggt agataatgct gaggcccaga 000800
000801 gcttgagttc cttttccaga tccctggagc agagtgggtg gcgggtcagg gtgagcctag ccggggtctc tgcagtgcac 000880
000881 gctctaggct acCTTTGGGC CCTTTTGAAG CAGCTCTTGG GTTTGTTATG GGTGTTAAGA TTTTTTCTTT TTTCTTTGTG 000960
000961 CTTTACTTCA TTTCTTAAGA AGCACATATT TGTAAAACCC ATGGAGTAGT GACTTGGAAA GGAGCTGGAC AGAGGCAGCA 001040
001041 GTCCACCCAC AGGTGGGGTA TGGAGACCGC CCGCTTCCTT CCTATTCCAT GATGCTGTGG CTCTGGGCTG TTGGCTGTCC 001120
001121 TCAGTTGCGC TTGGGATTCC TGCCAGCCAG CAGCTGCTGG AGTTAGAGGA TTCTGCTCTC CAAGAATTTG CAGCTTGTGT 001200
001201 CTGATTACCG TACCGTCTGG CAAAAAAATA CGTATGATGT TTTTACATTT TTAAAATCAA AATCCTGATG TTTTTTTGTT 001280
001281 CGTATGGTTG TTTGTTTCAA CCTCTTAACT CTTGATTTTT TCTGTTAAGT GATTTTACGT CTCTTAGCTG TGCAGAATGA 001360
001361 CAATTAATGG GAAGGCTGTC TTCCCCATAG TGAGACCTTG GTAAGGGCAG ACCTGACTGG TAGATTGTAG ATTGGGTGTG 001440
001441 CTCGTTTTTA TATTTCATTT TAGGAGCCTC ACAGTCTACT CAGAGAAAAA TAAAAGAAGG CAAAATGAGT CCTCCCCATT 001520
001521 TCCATGCAAG CCAGAACAGT TGGTTGTGTG GGAGCCTCGT GGTGCCCAGC GGAGGACGGC CAGGACCAGC TCCAGCAGCT 001600
001601 GGGGTGCAGT GCGGGGCGCA GGGCGTCCAG GTCCAGCTGG TGCAGGTGAG AGCTGGCCAG TCACACAGGC CAGCTGTAGG 001680
001681 CGGGGTGGGA GGGTCACGCA GGTCTGAGCA GTGTGCGGCA TGCTGCATCC CCTGCCCATC GCAGCACCCC CTGCCTGCCT 001760
001761 GCCCCTCGTG CATCCTCCCC TGTAGACTGC CCCAAGTCCT GTCTCCTCAC AGCCCAGCTC CTCCCTTTTT CCCAGCCTGT 001840
001841 CCTGCATCTG CTCAAGCTCT GAGTGTTGCT GGGACCGTGC ATCCACTTCC TGAACCTGTC TGTGCACAGC CCTGCGTCTA 001920
001921 GCCCCAGAGT AGCCCGCCTC CCTGCCCGAG GCCCCCAGGG CTGTTTTGCA GCAGGATGAG ATCTGTTTGA GGCCACCCTG 002000
002001 CCCTTCTTCT GCAGGGCTGG GGCAAAAGGG CTCCGCAGGC CGTCTCAGCC ACCCCATTTC TAGGGCGGCC TGCTTGTGGC 002080
002081 GCACTAGCAG CCTTTCTATG CTGAAGGTGG TGGGGGTCTT TTCAGTGTTT TTCTATTTTC TTTCCTACGA AACAGAGCCC 002160
002161 CTCCAGGGCA GGCCCAGGCC CCTCCCAGCC TGTCCGGGCC ACAGATACCT GCAGCTGTGG CCAGTTTCCA GGAGGTCTTT 002240
002241 GAGCACACCT GCTTCAGCAG CCCTGAGCAC ACCTGCATCT TCAGTCTCAG TTTGAGGGGC TGGAATGGGG AGGGAAGATG 002320
002321 ATTTGGAAGG ATTTGGGGAG AGAAGAGATA TACAAGCCGG GGCTGTCTGG GTTTGGCCCA GGTGTGTGCC CCTCTTCACC 002400
002401 ACTCCACTTT GTAGATTCCC TGTGGCAGGG GATGCGGTTG CAGGCCCCAC GGAAGTGCGG AGGGTGGAGG TGACGCTGGC 002480
002481 TCTGAGTTGG GAAACAGGCA CGTTTGTGGG TTCAGAGTCC TGGGAGAGTC TCGCCAAGGA AACAGGACCA GGCCTGGGGC 002560
002561 TCAGAGAGGC AAGAGGAGGG GCAGCCTGGG CAGAGGTGGG CTGGGAAGGG GGCAGGGAAG AGGCTGCGGG CAGCTGGGGG 002640
002641 TGGCCCTGTG CTGGTTGGAA GCTAGCGGTG AGCGTCAGAT GGGGGCTGAA GCTTGTCTTA GAGAGGGGCA GGAGCACTGG 002720
002721 TCCTTTGTTT CCAGCTTCTG AAGAGGTAAG AACTCCCCAG GAGCAGGGGC AGGGGGAGGG GGAGGACCAT CCAAGGAAAC 002800
002801 ACTGCCTCAG CTGGCAGGGC AGAGGTACAG AGTCAGGACC AGAGGCTTGG CAATAGGGAG ACGGTAGGGA AGCTGGTGCC 002880
002881 ACCGGCAGAA CAGGAGCAAG TAGGGGGTAT ACTTTTAAGA GATGCCTGAT Taaacctggg tttgagttct ttttctgtcc 002960
002961 cttaccagct agcgtagtct tggttactta agcactccgg gcctcagttt tgtcatctat gaaatgggaa cagtagtgca 003040
003041 gaccttgACA CACAGGAGCT TCTCAAACAG AAGGAATGAG AGGTGCAGAG CAGCAGCACC AGGAGCTCCG CTTCGGGGTG 003120
003121 TGAATGGCCA TGGGCGGACA TGCAGGTGCA GGACAGGCGA AGTGTGGGAC AGATGAAGTT TCTAGCCTGG ACTGTGAGGG 003200
003201 GCCTGGCAGC CTCCCCTCTC AGGAGCCCCT CTACCTGCCC TGGTCCTTCC AGCTGGCCCG TAGGCAAGCT GGGGCATGCA 003280
003281 GGGAAGGCCC TCTGTGGGGC CCGAGGATTT GCTGGAGAGC ACTCTGGGTA CACAAGGTTG GTGGGGGTAC AGGGCGTGCC 003360
003361 AGGGCACCTG CAAGGAGTTG AGGAGCGTGC CTTAGGAGGG AAATCAGTAT TTGGGCTGAC TGAGGGGAGG AGCTGGAGAG 003440
003441 CAGAAGGTTC CAGGCCCAGC AAAAGCTGCT GGGATCAAGG TGACAGAATG AGAACCAGGT GGGAACAGGT AGTACCCAGC 003520
003521 CCCCATAAAC AATTCCTGCT GGGTCCTCGG GCCTCCCTTG GAATACAGGG GGTGGGCTGG TTCTGCCACG CATTGCAGCT 003600
003601 GGAGGAGACT TCTCAGGTGA GACGAGGACC TTTGCTGCAC TCTCACAGAC ATGTGACAGG CCTTTCTGTG TTGCCTTCCC 003680
003681 AGGATGACCC CTCCGGCGAA GGTGTCCTGC CCTCGGCCCG CGGCCCAGCC ACCTTCCTCC CCTTCCTCAC TGTGGACCTG 003760
003761 CCCGTCTACG TCCTCCAGGA GGTGCTCCCC TCATCTGGAG GCCCTGCTGG ACCGGAGGCC ACCCAGTTCC CAGGAAGCAC 003840
003841 TATCAACCTG CAGGATCTGC AGTGACGGCA GCCTCGGCCT GGGCAGGCCC AAGGCCACGG TCTAGGACAC ACCTTCCCTG 003920
003921 AGACTCATGA CATGAGCCTG GGGAGACCTC ATTTGGTTTC CGTTCAGAAG ACCAGCGTAG CCCTTTTGAG ACTTTTGGGT 004000
004001 ACATTTATCA AAAATGTTTT CCTTTTGTTT TACCAGGAAT GAGTTCGGGC TATACTCTTT GAAACTGCCT TTGTGAGCAA 004080
004081 AGTGCTTTGG CAAGGCAAGG GTCTCCCTCA GCAGGGCTAG GTGCACTACA GCCTCTTTCC CCGTGTCCCG TTGGATCTGA 004160
004161 GCTGTGTAGC ACTTGTTGCA TTACAAAGAA AAAGACTTCT GCAGGAAATA GGGTAGAGAA CAGGCTGTCT AGTCAGATGC 004240
004241 AGCTTGATCT GTGGCAAAAC CAAGTGTGGT CTTTCAGCTT CAGTGTGTTA GCATCCCAGC ACCTGGGATG GGGTTTGTGG 004320
004321 GCAAGTTGAT TTTGCCACAC TGTAGGGCCC AGGTGGTCCC ATTGCCACCG TGAAGCCAAA TTCTAGCCCA AGTCTGGTAG 004400
004401 AGCAGTCGGG CAGCTAGTTT TCGGGGGAGG ATGATGTGGT GGGACAGAGG ACCTCAGTGG CCTATTACGG AGCCCTCTTC 004480
004481 CCAGACTAAA TTCATAGCCG AGAGCTCGGG GGGATGGTAG AGTTAAAATT TAAAATAATT TTCTAAATTC TGTATTTGGA 004560
004561 TATTAGTGTT TAAGTGGTAA TTTGGCAACA GTTTATAAAG TGATGTTCTG AATACCATAA ATTATGTGTA GGACTGTGA
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Predicted Small Protein

Name NONHSAT091690_smProtein_3683:3904
Length 74
Molecular weight 7673.7089
Aromaticity 0.013698630137
Instability index 97.6657534247
Isoelectric point 9.40289306641
Runs 7
Runs residual 0.0482545293858
Runs probability 0.0389507154213
Amino acid sequence MTPPAKVSCPRPAAQPPSSPSSLWTCPSTSSRRCSPHLEALLDRRPPSSQEALSTCRICS
DGSLGLGRPKATV
Secondary structure LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHHHHHHLLLLLLLHHHLLLEEEEL
LLLLLLLLLLLLL
PRMN -
PiMo -