ENST00000472890.1
Revision as of 18:12, 15 October 2014 by 211.100.51.162 (talk)
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
ENST00000472890.1 |
Source |
Gencode19 |
Same with |
lnc-TSC22D2-2:1,NONHSAT092681 |
Classification |
intergenic |
Length |
472 nt |
Genomic location |
chr3+:149956306..149957990 |
Exon number |
3 |
Exons |
149956306..149956389,149956722..149956785,149957667..149957990 |
Genome context |
|
Sequence |
000001 TGGGCAGAAA TGCACCAGGG AAAGGACATA ACGAAACTGG TTTTATCAGA ACAGCCTGCC TGAGAGAGAT CAAGCAGGGC 000080
000081 ACAGGTCACC AGGTATGCCC CTGGGCTCCT GCCGCAGCTG ATCGGGTGCT AGGTGCTGAG GATACACGTC TGGGAGAAAG 000160 000161 CAATTGGAAG AAATGCAAAG CTCTTCAAAG GAGACCTATA AAGTCATCTT TGTTTTGTTC ATTCTTCTCA TGTTTCTGCA 000240 000241 TTCTGGGCAT TCTCCTAAAT TGGGGAGAAA CCAAAATGCC CAGAAGTCAA ATTCTGCAAC TGTCATCATG CAAAATGTCA 000320 000321 AATGAGAGAA CCAAAGTATG CTGGATTCTA TATTGTTAGG AAGGGATGGT TAATTTGATT GACTCTTGGG AGCTATTTTT 000400 000401 CTAGCATTAA GTAATTCTAG GGAACCCTTC TGTGATCATC TCTGAGTAAA TAAAGAAGTG AAATTGCAAT TC |
Predicted Small Protein
Name | ENST00000472890.1_smProtein_275:358 |
Length | 28 |
Molecular weight | 3218.8574 |
Aromaticity | 0.0740740740741 |
Instability index | 126.040740741 |
Isoelectric point | 9.09918212891 |
Runs | 6 |
Runs residual | 0.0155662909286 |
Runs probability | 0.0419095566154 |
Amino acid sequence | MPRSQILQLSSCKMSNERTKVCWILYC |
Secondary structure | LLHHHEEEELLLLLLLLLLEEEEEEEL |
PRMN | - |
PiMo | - |