NONHSAT136388

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID

NONHSAT136388

Source

NONCODE4.0

Same with

,

Classification

sense

Length

2328 nt

Genomic location

chrX+:16860313..16862640

Exon number

1

Exons

16860313..16862640

Genome context

Sequence
000001 AAGGCGATTA GTTTTGTCTA ATAACCCATT TAAATGCCAA GTAAAAATAA AACTCCTAGT GTTGGGTCAG AAGCATATTT 000080
000081 GATTGAAATT AGCTTTTTGA AAACATTTAT ATCTCGGGAC AAATTGAGAT GGCCACATGC CTAGAATCCT AAGTTTCGGC 000160
000161 AGAATATGTA TATAAAGATG TCACTTGTGG ACAAAATAGT ACATAGAGGC AAATCACTAG ACAAATAAGC TTAGTGTTTA 000240
000241 CGTGACTGAA CAGTCATCCT GCTTTGGTTT CAGGTGTGGG ATTTGGACCA TGAGGGGCTC CCGTAGAGGA TGGCGGTTTG 000320
000321 TGTTTGATTC TGATTTGGGA TTTCAGTACA TATTCTCCAC TTCCCATAGA AGGCCACTTA TTCTTTGAAA ACTGGTGTTC 000400
000401 ATGTTTGCCG TTCAATGAAG TCCCTTGTCA AAGACAAGGA CGGTCAATTC ACGTGTCACT TTCACTAGGC AGAAGTTTCT 000480
000481 CCAATACCTT CTGGCTACTT GAAAGTTACT ACAAAAATTC CACCAGCAAA GTACTCCAGG TTTTTCAAAA GGAAATTTTC 000560
000561 ATTATGGATC AGTACCAACC GAAATTGATT TTCATTTCCA AAACAAACAC TGGCACCAAC ATTTTTACTT TGGGAAGACT 000640
000641 TGGCAGAGTG TTAGTCATGA TCTGTTACTT ACGTGTTCAG TCTGTTTTCT CACCCCCTTC TTAGTTACCA TCTCTTTTTT 000720
000721 AAGAAGAAAA AAGAAAAGCC ACAGTATTAT CAAGGTCTCT ACACTTGGAC TGGGGGAAAA TTTGAAATTA AGCACATAAC 000800
000801 TTTTTAATTA GTTCTTTGTT TCAATGTTGA ATGTGGCGCA GTTATGCAGA TGATTAATCA GGCTGCACTG ATGGAAGTTT 000880
000881 TGACTTTGTC CCTGGTATAA TTTGCATTGA AATGCTTTAT GAAATAAAAG GTTCTACTAG AACTGATGTT AGCACATTCC 000960
000961 ACTGAGCAAA ACTATCAGAC TGACACTTGT TAAATTGCTT ACTGGACTGA ATAAACTCTG TTTTGTCCAG TTAAAAGGGT 001040
001041 TTTCTCTTTG TTACAAGTGT TATTTGTAAA GTCCTGTCAC ATTCATGGTC GAAACTGGGT TGAAAGAATT GAAAATTGTC 001120
001121 CAACAGATAG ATAGATAGGA AACCGCCTGG AGTGGAGGAG GGTTGTATCT AAGCCTCCAC TATCAGTCAT GTTAATTCAA 001200
001201 GGGGCCACAG TGGAGGAAAA TAAATCCACA AAGTAGATTA TCTAATTACC ATCAAAATGA GTCAGAAGCA AAAAACACCA 001280
001281 CCCTCCAACA GCCTCTTAGG AGTACACCCT GTTCTGCTAC TAAAATACTA GACTCATTTC CCTGGTGGTG GGGGGGAATG 001360
001361 CAGGTATAGA TCAGAAATAT AATCCACCTT AAAATTAGTA CTAATGATCA CATTATTTCA CAAGAACTCT GCTGGATGTA 001440
001441 CAGCTCTTAA CATTTTATTA AGCCATTTGT GTAGCCCACC ACGTTTCTTT GTGGTGCTTG TCCTGTGTGG AAGATTGTAA 001520
001521 ATCTTGGGCC TGTTGCATAC TTCCAAGGGC TTTAAAGCAA TGTGATTAAC AGTACTTGGC CTGCTGCTTT TGGCTTACTT 001600
001601 TGTATTTTTA GCTAGATGCT ATTATAGTGT TGAAAGGATA TGGATTCTGT CTGGGATGCA TTTGTTGTCC TTTCAGAACC 001680
001681 CTTCCTCCCA TTACCCTGTG AATAAAAACA AATGGGACCC CCTGAGAAGG ACATCTTCCT ACAGTGATCA CCTCACCAGC 001760
001761 CCAGTGTTGT GGCTTTGTAG CGCACCCCGT ATCTACCATA TTCTAGAACA CTGTAATGCT ACTAGGCTGG CCCAGAAAAG 001840
001841 GTTTAAATGT TGAATTCACT TAAATTGCAA TTGTTGCACC ATCATGGAAT CGTGATGTGT ATTATTTATA TTGGCGGTGG 001920
001921 ACTCCAAGGT GTAGAGAAAA CTTGGGTCTT GGGTAATATG GACCATTTCA TCCTCAGACT TGTTAGGAGT ACATTTCTTG 002000
002001 GTCTTGAGAC CAGTATTTTT CAGTTATGTA TGCAACTGCC TTTATTACAC CTGGTTATCA CAATTCAATT CTCAGGTGTT 002080
002081 GCAGAAAAAT CTACCTCTTT CAGACTGTAG ATGGAAATAA CTGTGAAAAA AATGATGCAG ATATCTTCTA GTTTGTGCTA 002160
002161 AACACACTGC TTTATTTTTA CAGCCCACGT CTTTCATGAG GATACGAATT GTTAAGAGGC AGTCTCGTTT TGCTTTTCAA 002240
002241 AGACATTTTG TAGAGATTTT TCACTAATGT GAATCTGATT TTATCTACTT GATTCTGTAT AGATTAAGTA AATATGTATG 002320
002321 ATAAACTT
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Predicted Small Protein

Name NONHSAT136388_smProtein_1655:1852
Length 66
Molecular weight 7694.7766
Aromaticity 0.107692307692
Instability index 88.02
Isoelectric point 9.73028564453
Runs 9
Runs residual 0.0118269230769
Runs probability 0.0413158256296
Amino acid sequence MHLLSFQNPSSHYPVNKNKWDPLRRTSSYSDHLTSPVLWLCSAPRIYHILEHCNATRLAQ
KRFKC
Secondary structure LEEELLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLEEEEELLLLHHHHHHHLLHHHHHH
HHLLL
PRMN -
PiMo -