NONHSAT044059

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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Basic Information

Transcript ID

NONHSAT044059

Source

NONCODE4.0

Same with

,

Classification

intergenic

Length

3367 nt

Genomic location

chr15+:57592516..57599955

Exon number

5

Exons

57592516..57593122,57593541..57595211,57595725..57596125,57598797..57599268,57599740..57599955

Genome context

Sequence
000001 TCTCGCTCTG TCACCCAGGC TGGAGTGCAG TGGCGTGATC TCGGCTCATT GCAACCTCCG CCTCCTGGGT TCAAGCAATT 000080
000081 CTCCTGCCTC AGCCTCCTGA GTAGCTGGGA TTACAGGCGC CCGCCACCAC TCCCAGCTAA TTTTTGTATT TTTAGTAGGG 000160
000161 ACGAGGTTTC ACCATGTTGG TCAGGCTGGT CTCAAACTCC TGACCTCGTG ATCTGCCCTC CTTGGCCTTC CAAAGTGCTG 000240
000241 GGATTACAGG CGTGATGGAG ATGATACTCC CTAAATCACA AGGGTGTGGT GTGAAGATGA AATGGCTGCA CGTGACAGAG 000320
000321 GAGTTGGAGA ACAGGAAGCA AGTGGATTAC TTGGATGAAC TGTGATGGGC CCAAGAAGAA CTAAGCCAAT CACTCCAGGG 000400
000401 GGCGTTTTCC CAGGATCCAG GCAGAGAGCT GATTCCAGCA TCCACGTTGT ATCCCCCTCC CGCTGTGGCC GGGGTCTCCA 000480
000481 AGAGCCGGGC ACCCACTGCA GAGCTTCCAA GCCCAGGCCC ATTTGAACAC AGGAGGACTT TTGAGGTTCA TTTAACCCCA 000560
000561 AAATCAGTGA TTCTACATCT CAAGCTCATA TTTTGAAGTG TTTACGGGGT TGCAGTGAGC CAAGATTGCG CCATTGCACT 000640
000641 CCAGCCTGGG TGAGAGAGCG AGACTCCATC TCTGAATAAA TAAAGTAACA AAATACATTT CAGTCTCGAG CTCCAGTTCC 000720
000721 CTGCCAGGAA GAGCTGAAGC TGAGCTCTGG CACCCCCTGC TTCTTCTCCC TCATCCCTAA AACATGTGGG GTACTGGGTG 000800
000801 CCAAAGGAGA TCTGAAGATG GCCACCACTC AGACCAGCAG TAGAGGCCAA GAAGGTGGTG AGAAATTTTA AGGTATTGTA 000880
000881 GCATATGCTC TCCAGGGTGA GGACACAGGA TGCTGGGACC TAAGGAGGGA GAAGTTAACC CAGAGAGGGC CCAAGTCAGG 000960
000961 GAGGACCTGA CTGTGGTGAC AGAGCCAGTC ATGCTAATAA TAGGAGCAGT GGTTTTGCAA TCACAAATAT TGGTCTGGGG 001040
001041 GACTGCGGGC CCAATGTGGT GGGAGTTTTA GAGCAGGGAC CCCTCCACTG TACGTGGATT CTTATACTTG CTAAGTTGCA 001120
001121 CTGAATTCTC AATCAACCCA TTTGGAGGCT CTCACCAAGA CAGGAGTCCC TTTGAATTGG TAGGATGTTA AAAGCTTCCT 001200
001201 CCAGCCATTG ACCCTGGGTC CCATTGGTAG AAATCAGATA ATAAATCAGA TTTTCCAGGT AATCCTCAGT TTAATGTCCA 001280
001281 TTCCCTCATT CAATCAATTA TTCAATTACA AATCATTTTT AATATGATTT TATGGTTCAG GAATTCAGGC AGGGCTCAGA 001360
001361 TGGGCAGTTC TTCTGCCCCA CATGGCATTG GCTGATAACA GGCTACCCCA AGGAAATCAC AGTGTAATGG GAGATGGGAA 001440
001441 ATAGGTTAAC ACAAAGTTAC TATACTACAA GAAAAATCTT CAAATCTTCA ATCTTCATTC TTCATGGGTG TGAGTCTTCT 001520
001521 CTGGTGGAGA AGAGAGTTCT TTGCTAAATT ATATTCCTGT GTTAGCCAGC CAAGCACACA CGGAGTACAG CTGTCCCTTG 001600
001601 CTATTCATGG CAGATTGATC CCAGACACTG CCACCCCCAG CCCTGTGAAC ACCAAAACCC ATGGATGCTC AAGTCCTTGA 001680
001681 TATAAAATGG TATGGTATTT GCACATAACC TACACACATC TTCCCATATA CTTTAAATCA TCACTAGATT ACTTATAATA 001760
001761 CCTAATGCAA TGTAAATGCT ATGTAAGTAG TTGCTACGCT GTATTGCTTA GGGAATAATG ACAAGAAAAA AAGGCTGTAC 001840
001841 AACTTCAGTA CAAATGCTAT CATTCATTTT TTTATCTGAA TATTATGATC CATGAATACA GAGGGCTGGC TGTAAAAAGA 001920
001921 ATGTACAGTT TGGTACTTTA CTCCTAGTTT AAGTCATCTC TTTCGGCCCA TACAGGTTGC CTGGGGCAGG GCGGTGGTGA 002000
002001 GTGTGTTGAG TCGGCCCTAT ACCCTGTTCC ACAATGCCTG GTGTCCTTGG CACGTAGCTT GCAGGGCTGC TTCCATGGAT 002080
002081 GGCTGCCTCA TCCCCCACCC CTCCTTCATG GCACCCTCTT TTCTCCAACT CCTTTTCCTC TGCTGAGTCC TACCTTTTCT 002160
002161 TGCCAGACCA GGGATTTGCC AATTATTCTG GATGGGCACA GGGAAGGGGC CCTCAGATCC TGCAGAGGGA GCATCTGAAA 002240
002241 GACAATGAGA CCCTGTACAC AACCAAGCTG AGCCTCCTCC TCTCTACCCC TGCCTGTGGC TCTCCCGTCT CCTGGCATTC 002320
002321 TAACCTGCCA CTGAATTCTT CCCACGCCAA ACGCAGGTTA GGAACCTAAG CTCGGATGAA ATGCTGGCTT AGACCTCATT 002400
002401 GCTACTGAGA AGCAGAAACC ACACTTTTTA GTTGGTAGAG GTGGATGTGG ATTGGGGCCA TAAAGTTTCC TCAATCATTG 002480
002481 AATAAGGATT TCATTATTTG GACTAACTAA ATACATTAGA TTATTTATAC TAACTAAATA AATTAGATTT ATTTTTCGAA 002560
002561 GTTTAAAATC ATTTTCAATA GTGACGAAAA AGGCTGTAGA TGAGATGGGA GAATCTTTCG ACGCCAAATT CTTCCCATCT 002640
002641 CCTGCCTAGT ATGTATCACT ACACCTTGCC CAGAGAGACG GAGGACGCGC ACAGCCCGAG GAGGCAGAGC CCCAGACGGG 002720
002721 AATGGGCTTT TCAGAGGTGG GGTGCGGGCG AGGGGACGAT GCATTATTTT TAATATTTGA TTTATTTTTC CAACTGGACT 002800
002801 TCTTCCCGGG GCTCTTTCTG GGCCCAGCTG CCTTTGTGAT CCCGCGCCCC GGTCCTCGGC CTCTCACCTC CAGCGCCGGG 002880
002881 GCGCCCCCTG CTGTCGGAAG CGGCTGTGAC CGGGCAGAGG TGCTATCTGG GACTCTGGGT TCTCAGCCCG GGGACAGCGA 002960
002961 ACCGAGGGGC AGATGATCCA TCAGAAAAGA GCCGGCACTG CCCAGCCCCG CGCCCCTGCC CCTGCCTTTT TCCGGGAGCG 003040
003041 CGCCGCGCCG CACCCGCTAC GGCCGCTTGA CCCCATCTTT GAGCCCGGCC CCAAGCTCTG GGACCGTCGT GCCCCTCATC 003120
003121 AAGGAAGAGC CAAGGACCCC AAGGAGAAGG TAGAAAGGAG TTCATGAAGG CAGAAATGCC TGGGGCCCAC GAACATCCCA 003200
003201 GTGTGGCCCT GGACGGGACA TCATGCTGGG CAACACAGCT AAAATGCGGG TGAAGACCAG ATTTCTTGCA CATGGCGGTG 003280
003281 ACGGGATGCT CCCTAGAGAG CTTCAAGTGG ATTCTTTGCT TTTTATTTTC TCTCTTAATA AAAATGTATG ATGTTTACAT 003360
003361 TGTCAGA
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Predicted Small Protein

Name NONHSAT044059_smProtein_2078:2368
Length 97
Molecular weight 10544.6497
Aromaticity 0.104166666667
Instability index 60.10625
Isoelectric point 8.97943115234
Runs 14
Runs residual 0.0115979381443
Runs probability 0.031828046534
Amino acid sequence MAASSPTPPSWHPLFSNSFSSAESYLFLPDQGFANYSGWAQGRGPQILQREHLKDNETLY
TTKLSLLLSTPACGSPVSWHSNLPLNSSHAKRRLGT
Secondary structure LLLLLLLLLLLLLLLLLLLLLHHHHEELLLLLEELLLLLLLLLLLLEEHHHHLLLLLEEE
EHHHHHHLLLLLLLLLLLLLLLLLLLLHHHLLLLLL
PRMN -
PiMo -