NONHSAT072515
Revision as of 18:28, 25 July 2014 by 124.16.129.48 (talk) (Created page with "Please input one-sentence summary here.
==Annotated Information==
===Transcriptomic Nomeclature===
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===Functio...")
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Contents
Annotated Information
Transcriptomic Nomeclature
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Function
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Regulation
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Expression
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Allelic Information and Variation
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Evolution
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Labs working on this lncRNA
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References
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Basic Information
Transcript ID |
NONHSAT072515 |
Source |
NONCODE4.0 |
Same with |
, |
Classification |
intergenic |
Length |
796 nt |
Genomic location |
chr2+:96479687..96480574 |
Exon number |
2 |
Exons |
96479687..96479710,96479803..96480574 |
Genome context |
|
Sequence |
000001 CTCCACACTG GTTGGTGACC TGGCTCTGCA GTTCACTCTG CTGCTTCAGA TGAAAATTTT CAGGTCTGTC TGCCACTGTA 000080
000081 GTGAAGGACT GCTTTGGGTA GTGTCTGTGG AGAAACTTTT TAAAGGACAT AGTTAAAATA TTGTGCTACA AACCAATTCT 000160 000161 TGAACACCAA TCGTTTTGTC CTACCTCTCT GTGACAGTGA AAGATGGCTG TGCTCTTGGC AAAGGTCATC TCTCTGTCAT 000240 000241 GATTCTGGAT CTCCTTTTCT TCTCCTGATT ATCTGTCACT CAGTTATCCC CACTGTCTTC CACAACTTTA ACCTCAGCTT 000320 000321 CTCTATTCTA GGAGACTCTT CTCGCAGGCT CAAGGCTCTC CTACCCTCCA TCATTCCTCC CTCTACCCCA CACAGCCAGC 000400 000401 ATGTGTCCAG CTAGTCTATC CTTCAGCCAA ACTTCCTTAG AAAGAGGCCT TACCTCACTG TCCCTACCCA TCTCCTCTCT 000480 000481 GACTCACTTC TTAACTCCAT GACTGGGTTC TGGTTTCTTT CCCTTGCCTG TTGTGACTTC CTATGGACAC AGCCAAAAAC 000560 000561 CATCACATAG TCCTGTTGTA TGGCATCCCC TCCATCTTGA AATGTCCTCT CCCTCAGTTC CTATATGTTA TCACACATGC 000640 000641 CTGCCTTGGC TTCTCCCTCT AGTTGTTCCT TCTCTGTCTT CTGTGGGCTT CTTATTGTCT GCTCACTCCT TCTTCAGTGT 000720 000721 CCTCACATGG GCTTCCTTCC CTTCTCAGCT GATGCCATCA CCTGGGGAAT CACAGTTACT CAGCAGCACT GGGGCC |
Predicted Small Protein
Name | NONHSAT072515_smProtein_542:661 |
Length | 40 |
Molecular weight | 4368.2348 |
Aromaticity | 0.102564102564 |
Instability index | 46.6743589744 |
Isoelectric point | 7.85516357422 |
Runs | 5 |
Runs residual | 0.0405354449472 |
Runs probability | 0.096025437202 |
Amino acid sequence | MDTAKNHHIVLLYGIPSILKCPLPQFLYVITHACLGFSL |
Secondary structure | LLLLLLLEEEEELLLLLLLLLLLLHHHHHHHHHHHLLLL |
PRMN | LLLLLLLLLLLLLLLHHHHHHHHHHHHHHHHHHHLLLLL |
PiMo | iiiiiiiiiiiiiiiTTTTTTTTTTTTTTTTTTTooooo |