Lnc-HPCAL1-1:5

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Annotated Information

Transcriptomic Nomeclature

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Function

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Regulation

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Expression

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Allelic Information and Variation

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Evolution

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Labs working on this lncRNA

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References

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Basic Information

Transcript ID	lnc-HPCAL1-1:5
Source	LNCipedia2.1
Same with	NONHSAT069108
Classification	intergenic
Length	3048 nt
Genomic location	chr2+:10589240..10597755
Exon number	5
Exons	10589240..10589307,10589870..10590407,10592407..10592595,10594139..10594184,10595549..10597755
Genome context
Sequence	000001 CCCGGATCCT GAGTCTCCAA GCCGCCCACT ACCCTCTGCT TTACCGGATG GAACTCATCA GTAACTAGGT CTGAGGCACA 000080 000081 GTCAGTGAAT ACCTGTTTAA TGAATGCATG CATAAATGAA TGAATGGATG ATCCAGCTCT TCCTGGAGCA GGCACGACTT 000160 000161 CCACAGAAAC AGAGCAAACG CTAGCCGTAA GCAGAAGTGA GTCTTCTTCC TATGTGAAGG GATGTGGGGG TGGTACGCCC 000240 000241 CTATCAACTT TATCTTTACA TAGTCCTTGA GCGCCCACCG GGCACCGTGT TCCCCGGACT AGAGGGAGGG AGAGGGGGGT 000320 000321 TAGCTCCACC CTTAACAAGC TTAATTCTTG ATGAGATTAA CCATCAAAAC CCATCAGAGA ACGTTATAGC TCCAGCGCTG 000400 000401 AATGAGACAT CTTTGATTCT GTGGTGATGC GGACTTTGTG CCTCTCTGTG AGGAATCACT TTGTTCCAAT GACGCAATTT 000480 000481 TCCTCACACT CCGGAAGTGT CCTGCACTGC CAGAATCGCC CAGCTTCCCG GCACACCTAT CAACCAGTCG TTCCCAGCAC 000560 000561 TGCCCAGTAT GCAGCCTCCA GGCAGAGGGC CTGGATGTCT TGGCAGGTGT TTCCGAAAAA TCCAATCCAC CCTCCAAGGT 000640 000641 GGAAAGTGTG CCATCTCTGC CCATAATCCA AATGGCGTGC CTGAGGCATA GAAAGCAGCT TTCAGGGAGG CCTTCCTTCC 000720 000721 TCTGAGCAAT GGTGGCATCA TCAGAAAAGT GGAGCTCCTC CAAAAGGATC TGCTGGAAGC AGAGGACGCC CATGTGGAGC 000800 000801 AGCATGCGGA GGGCCCTTGC ACAACCTGGG TCTTCAGGAA GTTCCTTGCC CAGGTGTTGG CCCAGCTCTC TTCATGGTTC 000880 000881 CAAGAAGGCT GCCCCAGGAA GGCTTGTGGA CAGAGGGAGA AGCATCTCTT CCTCTATGTC TCTTTTTATC TAAGAAACCA 000960 000961 GTTTGACCAG CATCCTTCCC CTCGGCTCCC CAGGAGGAAT GCACGGATCC CTTCGCCTTC CCCCATCCCT CCATGGTTGA 001040 001041 CTAAACCCAC TAGGATCCAC TCTTTTGCGT GGAAATGGGT TCAGGCCTCC CACGAAGAGC ATGAAGATGC CCTCTGTTAT 001120 001121 GGGTTACATT ATGTCCCCTG CCCCCGAGAC CGTATGTTGA GTCCTAACCC TAGTATTGCA GAACGTGAAT TTATTAGGAG 001200 001201 ATAGGGTCTT TATGGAGGTC ATTAAGTTAA ATGAGGGTGT TAGGGTGGGC TGGTGTCCTG ATATAAAGGG GAAATTTGGG 001280 001281 GCTGGGTGTA GTGGCTCACA CATATAATCC CAGTGCCTCG AGAGGCCAAG GCAGGAGGAT TGCTTGAGGG CAGGAGTTCA 001360 001361 AGACCAGCTT GGGTAACATA GGGAGACCGG TATCTATAAA AAAAATTAAA AACAAAAAAA TTAGCCGAGT GTGGTGGTGC 001440 001441 ATGCCTGTAG TCCCAGCTAC TCAGGAGGCT GAGGTGGGAG GATCGCTTGA GTCCAGGAAT TTGAGGCTGC AGTGAGCCAT 001520 001521 AAAAAGATGG GGGACGATGG AGACGCACAG GGAAAACACC TTGTGAATGC GGCAGAGATA AGGGTGATGC CTCTACACAC 001600 001601 CGAGGAACTT CAGAGACAAC CAGTAAGTCA CTGGGAGCTC GGGGAAGGCA CAGCGCAGAT GCTCGCTGCC CTCAGAGGGA 001680 001681 AGCCAGCCCG CCAACCCCTT GATCTCAGAC CTCTGGCCCC TGGAACTGTG AGATGATAGA TTTCTGTCGT TTAAGCACAG 001760 001761 TGGTGCTGTG TTATAGCAGC CCTAGGGAAC CATCCACTAT CAGAACAAAA GCAGGGCTGG ACTGCTAGAA GAAAGGAGAG 001840 001841 GAGAATGGCA GAGGATACCC ACCTTGGGGC TGAATCTGAG ATCACTCCAG GGCTCCCCAG GTTGTTTTGA AGAATGGAGA 001920 001921 TGGATTTGTG CAGGGCTCAC TGTAGAAGCT CAGTGCAGCA TGCGACGCTT ATAAGGCTGC AATCCCCAGA GCTCAGTCCC 002000 002001 TGAAGAGCGC TGCATTCACA GACATCAGCC AGCAGACAAA CCAGTACCTA TTGTCCCTGA CCCCCAGAAT CCAGCAGACA 002080 002081 TATAAAAGAT GGTTGTTAAC CCCACTAAGT TTTGGGGTAA TTTGTTATGC AGCCATGCAA CTGAAAGAAG CAGCTACAAT 002160 002161 ATTTTTATAA TGAAATTCTT AGCCAGGACC CTCATAGCCT AGCAAGAAGT TCTGTCTGGA AGAGCCCAGC TTTGGGGTTG 002240 002241 GGTATGTCTG GGTTTTAATA TGTCAAGAGG GCAGGCCCTG GAGACGGAGC ACATGGATTT GAATCCCAGC CTCTCATAGG 002320 002321 CAGGTTAATT AATTTCCCTG AATCTCAGTT TCTTCATCTC TCAATGGAGA AAATAATAGA AGCCACCTCA CGGGAATTAA 002400 002401 ATGAGATTAT TTACGCACAG CACCAAGGCT GTGGCTACTG TATTTGACCC CTGAAACAGT TAATTTTTCT TGACATCCCT 002480 002481 TCCTTGGTAT ATGTATTAGT CAGGGTTCTC TAGAGGGACA GAACTAATAG GATATCTCTC TCTCTATAGA TTTATATAAA 002560 002561 GGGGAGTTTA TTAAGTATTA ACTTACACAA TCACAAGGTC CTGCAATAGG TCGTCTGCAG GCTGAGGAGC AAGGAGAGCC 002640 002641 AGTTCAAGTC CCAAAACTGA AGAACTTGGA GTCTGATGTT CGAGTCCAGG AAGCATCCAG CACAGGAGAA AGATGGAAGC 002720 002721 TGGGAGGCCA GGCCTGACTC TCCTTTTCAT GTTTTTCTGC CTGCTTTATA TCCGCTGGCA GCTGATTAGG TGGTGCCCAC 002800 002801 CAGATTAAGG GTGGATCTGC CTTCCCCAGC CCACTGACTC AAATGTTAAT CTCTTTTGGC AACACCCTCA CAGACACACC 002880 002881 CAGGATCAAT ACTGTCAGTT CAATCAAGTT GACACTCAGT ATGAACCATC GCAATACAAT AGGATTACTT TCTGTGATAA 002960 002961 CCTGTGTAAA AATAGGCAGT CATGATTTTC CTGTTGTGTT CTTCAGGTGT AAAACAAAAA ATTTTAAAAG AAGAAACTTC 003040 003041 AATTTTAA

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